RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 SOCS6O14544 535 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 POP7O75817 140 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR2B3O76000 313 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 RPS5P46782 204 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 GZMKP49863 264 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR10A3P58181 314 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 ARPC4P59998 168 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 DEFB103AP81534 67 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 FUT5Q11128 374 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 TCEAL5Q5H9L2 206 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 MEDAGQ5VYS4 303 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAM205BPQ63HN1 556 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 HIST2H2AA3Q6FI13 130 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 VRK2Q86Y07 508 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 KAT2AQ92830 837 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 MS4A3Q96HJ5 214 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 ATF6BQ99941 703 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZSCAN5AQ9BUG6 496 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 HDHD2Q9H0R4 259 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 PPP1R3EQ9H7J1 279 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZSCAN32Q9NX65 697 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 ABT1Q9ULW3 272 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 SIRT4Q9Y6E7 314 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 A0A1W2PQ72 361 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC30A4O14863 429 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 LCMT2O60294 686 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 NR2F6P10588 404 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ELK1P19419 428 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 DDCP20711 480 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ENPP1P22413 925 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 MTNR1AP48039 350 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 POLR2LP62875 67 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 PLK5Q496M5 336 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 IDNKQ5T6J7 187 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 BCL2L15Q5TBC7 163 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 FCRLBQ6BAA4 426 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 QSOX2Q6ZRP7 698 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAM181AQ8N9Y4 354 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 PLA2G15Q8NCC3 412 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 BEST4Q8NFU0 473 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR6C4Q8NGE1 309 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 NEIL3Q8TAT5 605 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 RAET1EQ8TD07 263 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ING5Q8WYH8 240 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 RIPOR3Q96MK2 946 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 QRFPRQ96P65 431 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 EFCAB11Q9BUY7 163 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SGPP1Q9BX95 441 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 CXXC1Q9P0U4 656 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 CFAP54Q96N23 3096 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 C4orf51C9J302 202 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 CRYZL1O95825 349 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ARSBP15848 533 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 MLLT3P42568 568 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SNRPNP63162 240 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ABATP80404 500 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF697Q5TEC3 545 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 VASNQ6EMK4 673 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SMARCD3Q6STE5 483 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 AMIGO1Q86WK6 493 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 NKAIN4Q8IVV8 208 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC37A3Q8NCC5 494 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 MORN4Q8NDC4 146 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ANKK1Q8NFD2 765 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR4Q3Q8NH05 313 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZFAND1Q8TCF1 268 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 HCAR2Q8TDS4 363 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SPRYD4Q8WW59 207 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 UFD1Q92890 307 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 CXorf40BQ96DE9 158 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 FUZQ9BT04 418 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZDHHC5Q9C0B5 715 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 KLHL31Q9H511 634 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 C6orf106Q9H6K1 298 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLA2Q9H6Q3 261 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 CIB4A0PJX0 185 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 A8MVJ9 347 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 FOXE1O00358 373 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 GABRPO00591 440 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 PGRMC2O15173 223 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 MAGEB4O15481 346 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SPINT1O43278 529 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 NARSO43776 548 aaKnown RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 LILRB5O75023 590 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 SYN1P17600 705 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 TRHRP34981 398 aaPredicted RBP9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 BSGP35613 385 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 TRIM23P36406 574 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 NNMTP40261 264 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR3A3P47888 321 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 INPP1P49441 399 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 RAB33AQ14088 237 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 FCN2Q15485 313 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 TPGS2Q68CL5 300 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 ESPNLQ6ZVH7 1005 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 CCDC116Q8IYX3 515 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAM26EQ8N5C1 309 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 GDPD1Q8N9F7 314 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 CCDC120Q96HB5 630 aa9.75□□□□□ -0.85
CDC42SE1-207ENST00000540998 TEFMQ96QE5 360 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms