RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 FEN1P39748 380 aaKnown RBP11.33□□□□□ -0.6
COPS7A-211ENST00000540408 MC3RP41968 323 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 PPICP45877 212 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 PCYT1AP49585 367 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 STARP49675 285 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 GFRA1P56159 465 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 GPX6P59796 221 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 CAV1Q03135 178 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 ACKR1Q16570 336 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 SLC48A1Q6P1K1 146 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 FAM111BQ6SJ93 734 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 YTHDF3Q7Z739 585 aaKnown RBP11.33□□□□□ -0.6
COPS7A-211ENST00000540408 CCDC25Q86WR0 208 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 CENPLQ8N0S6 344 aaPredicted RBP11.33□□□□□ -0.6
COPS7A-211ENST00000540408 CNEP1R1Q8N9A8 125 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 WDSUB1Q8N9V3 476 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 FBF1Q8TES7 1133 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 COX4I2Q96KJ9 171 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 Q96MF0 132 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 COL21A1Q96P44 957 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 CDK15Q96Q40 435 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 CCL19Q99731 98 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 SLC39A3Q9BRY0 314 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 MED18Q9BUE0 208 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 ITPAQ9BY32 194 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 MRPL1Q9BYD6 325 aaKnown RBP11.33□□□□□ -0.6
COPS7A-211ENST00000540408 NMRK1Q9NWW6 199 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 EHD3Q9NZN3 535 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 C6orf203Q9P0P8 240 aaPredicted RBP11.33□□□□□ -0.6
COPS7A-211ENST00000540408 CLCF1Q9UBD9 225 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 DKKL1Q9UK85 242 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 DTX4Q9Y2E6 619 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 UTP11Q9Y3A2 253 aaKnown RBP11.33□□□□□ -0.6
COPS7A-211ENST00000540408 MRPS18CQ9Y3D5 142 aaKnown RBP11.33□□□□□ -0.6
COPS7A-211ENST00000540408 TESMINQ9Y4I5 508 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 PCDHA9Q9Y5H5 950 aa11.33□□□□□ -0.6
COPS7A-211ENST00000540408 HRNRQ86YZ3 2850 aaPredicted RBP11.33□□□□□ -0.6
COPS7A-211ENST00000540408 KIAA1549Q9HCM3 1950 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 DOCK7Q96N67 2140 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 A0A1W2PNV4 684 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 FRG2CA6NGY1 282 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 LRRC14BA6NHZ5 514 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 OR6C70A6NIJ9 312 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 SMAD7O15105 426 aaKnown RBP11.32□□□□□ -0.6
COPS7A-211ENST00000540408 BCAS2O75934 225 aaPredicted RBP11.32□□□□□ -0.6
COPS7A-211ENST00000540408 KLHL2O95198 593 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 CNTFP26441 200 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 PCSK6P29122 969 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 TYK2P29597 1187 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 CD79BP40259 229 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 PTGDSP41222 190 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 MAGEA4P43358 317 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 KCNJ5P48544 419 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 LHX2P50458 406 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 EEFSECP57772 596 aaKnown RBP11.32□□□□□ -0.6
COPS7A-211ENST00000540408 PSPHP78330 225 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 MRPS25P82663 173 aaKnown RBP11.32□□□□□ -0.6
COPS7A-211ENST00000540408 IRF9Q00978 393 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 HMGCS1Q01581 520 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 FAM27E3Q08E93 113 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 EXOSC7Q15024 291 aaKnown RBP11.32□□□□□ -0.6
COPS7A-211ENST00000540408 BCL2A1Q16548 175 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 MROH9Q5TGP6 573 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 DESI1Q6ICB0 168 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 METTL4Q8N3J2 472 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 GBP7Q8N8V2 638 aaPredicted RBP11.32□□□□□ -0.6
COPS7A-211ENST00000540408 OR52R1Q8NGF1 315 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 CTHRC1Q96CG8 243 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 KLHL29Q96CT2 875 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 PIK3IP1Q96FE7 263 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 PGM2Q96G03 612 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 WFIKKN1Q96NZ8 548 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 LRRC1Q9BTT6 524 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 NTMT1Q9BV86 223 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 FAIM2Q9BWQ8 316 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 ELOVL6Q9H5J4 265 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 UBTD1Q9HAC8 227 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 PFDN4Q9NQP4 134 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 KLHL28Q9NXS3 571 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 ELOVL5Q9NYP7 299 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 MAT2BQ9NZL9 334 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 ZNF639Q9UID6 485 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 TMCO1Q9UM00 188 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 PLLPQ9Y342 182 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 VPS13CQ709C8 3753 aa11.32□□□□□ -0.6
COPS7A-211ENST00000540408 A0A096LPK6 155 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 SLC22A20A6NK97 555 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 OR7A17O14581 309 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 TO15178 435 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 TNFSF13O75888 250 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 SIX3O95343 332 aaPredicted RBP11.31□□□□□ -0.6
COPS7A-211ENST00000540408 PEPDP12955 493 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 ZNF708P17019 499 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 IL12BP29460 328 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 ALDH9A1P49189 494 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 PLTPP55058 493 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 MRPS22P82650 360 aaKnown RBP11.31□□□□□ -0.6
COPS7A-211ENST00000540408 MGAT2Q10469 447 aa11.31□□□□□ -0.6
COPS7A-211ENST00000540408 EFR3AQ14156 821 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms