RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 EIF2S3P41091 472 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 NR0B1P51843 470 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 KLHL26Q53HC5 615 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 PDE12Q6L8Q7 609 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 IL27RAQ6UWB1 636 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 PTCHD4Q6ZW05 846 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 PUSL1Q8N0Z8 303 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 NANOGP1Q8N7R0 232 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 MRPL43Q8N983 215 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF527Q8NB42 609 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 OR10G2Q8NGC3 310 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 C2orf15Q8WU43 125 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 EDEM1Q92611 657 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 RFT1Q96AA3 541 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 ESAMQ96AP7 390 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 BBS4Q96RK4 519 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 MAP3K3Q99759 626 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 THAP7Q9BT49 309 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 SPRTNQ9H040 489 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 TFB2MQ9H5Q4 396 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 BRD9Q9H8M2 597 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 NLGN3Q9NZ94 848 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 PCTPQ9UKL6 214 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 POFUT2Q9Y2G5 429 aa8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 AAR2Q9Y312 384 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-243ENST00000540387 MYO9BQ13459 2157 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 NCF1BA6NI72 391 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 NCF1CA8MVU1 366 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 MCRIP1C9JLW8 97 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 PRRG1O14668 218 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 TERTO14746 1132 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 LRRTM2O43300 516 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 TGM5O43548 720 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 RP2O75695 350 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 S1PR4O95977 384 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 RB1P06400 928 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 FDXRP22570 491 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 HOXA6P31267 233 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 VIPR1P32241 457 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 SCNN1AP37088 669 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 CDC42P60953 191 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 TIAL1Q01085 375 aaKnown RBP eCLIP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 DEFA6Q01524 100 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 MAP4K2Q12851 820 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC14A1Q13336 389 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 DGKKQ5KSL6 1271 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 TPGS2Q68CL5 300 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 RAET1GQ6H3X3 334 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 KLHDC8BQ8IXV7 354 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 GPR65Q8IYL9 337 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF687Q8N1G0 1237 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 KRTCAP2Q8N6L1 136 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 ASZ1Q8WWH4 475 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 C1GALT1C1Q96EU7 318 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 KLHL5Q96PQ7 755 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 SAP130Q9H0E3 1048 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 MED11Q9P086 117 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 CFAP97Q9P2B7 532 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 ZNF624Q9P2J8 865 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 DISC1C4P0D8 188 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 TNFRSF11BO00300 401 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 CASKO14936 926 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 KERAO60938 352 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 ENTPD6O75354 484 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 ECI2O75521 394 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 NCR1O76036 304 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 HPXP02790 462 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 NFYAP23511 347 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 KDELR2P33947 212 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 SPAM1P38567 509 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 ACTR1BP42025 376 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 SRP9P49458 86 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 CLDN8P56748 225 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 RPS25P62851 125 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 C1DQ13901 141 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 CRTC2Q53ET0 693 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 TEX30Q5JUR7 227 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 RHOUQ7L0Q8 258 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 MAMDC2Q7Z304 686 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 SCD5Q86SK9 330 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 CIR1Q86X95 450 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 OR56A4Q8NGH8 313 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 OR5M9Q8NGP3 310 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 TPD52L3Q96J77 140 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 C7orf34Q96L11 122 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 C12orf66Q96MD2 445 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 TSNAXQ99598 290 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 SPATA5L1Q9BVQ7 753 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 DPY30Q9C005 99 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 NKX2-4Q9H2Z4 354 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 BEX1Q9HBH7 125 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 SLC25A19Q9HC21 320 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 C11orf16Q9NQ32 467 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 ENAMQ9NRM1 1142 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 MARCH4Q9P2E8 410 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 EXTL2Q9UBQ6 330 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 IRAK3Q9Y616 596 aa8.95□□□□□ -0.98
CTNNA1-243ENST00000540387 NLRC5Q86WI3 1866 aa8.94□□□□□ -0.98
CTNNA1-243ENST00000540387 CCL22O00626 93 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms