RNA–Protein interactions for RNA: ENST00000539332.2

DDB1-213, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-213ENST00000539332 COX20Q5RI15 118 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 ZNF362Q5T0B9 420 aaPredicted RBP8.31□□□□□ -1.08
DDB1-213ENST00000539332 ENPP6Q6UWR7 440 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 ABHD13Q7L211 337 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 PRSS48Q7RTY5 328 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 AKAP14Q86UN6 197 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 OFCC1Q8IZS5 231 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 SPARTQ8N0X7 666 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 SVOPLQ8N434 492 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 DNAJC22Q8N4W6 341 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 ZNF655Q8N720 491 aaPredicted RBP8.31□□□□□ -1.08
DDB1-213ENST00000539332 FAM86B1Q8N7N1 296 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 C11orf65Q8NCR3 313 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 BPIFB6Q8NFQ5 453 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 SUN3Q8TAQ9 357 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 IFI44Q8TCB0 444 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 SFXN5Q8TD22 340 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 NETO1Q8TDF5 533 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 RHBDD1Q8TEB9 315 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 UCN3Q969E3 161 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 RERGQ96A58 199 aaPredicted RBP8.31□□□□□ -1.08
DDB1-213ENST00000539332 EXOSC8Q96B26 276 aaKnown RBP8.31□□□□□ -1.08
DDB1-213ENST00000539332 CNRIP1Q96F85 164 aaPredicted RBP8.31□□□□□ -1.08
DDB1-213ENST00000539332 ZNF681Q96N22 645 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 MAPKAP1Q9BPZ7 522 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 DPH2Q9BQC3 489 aaPredicted RBP8.31□□□□□ -1.08
DDB1-213ENST00000539332 NUDT22Q9BRQ3 303 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 GLIPR2Q9H4G4 154 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 FAM60AQ9NP50 221 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 TMEM9BQ9NQ34 198 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 SEMA5BQ9P283 1151 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 C5AR2Q9P296 337 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 PHF11Q9UIL8 331 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 BAG5Q9UL15 447 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 DAPP1Q9UN19 280 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 NAALAD2Q9Y3Q0 740 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 UGT2A1Q9Y4X1 527 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 PCDHGB1Q9Y5G3 927 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 CFAP54Q96N23 3096 aa8.31□□□□□ -1.08
DDB1-213ENST00000539332 FAM149AA5PLN7 773 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 M0R3G1 203 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 UPK1AO00322 258 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 PGRMC2O15173 223 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 HCRTR1O43613 425 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 GALR3O60755 368 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 B4GALT2O60909 372 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 SNAP29O95721 258 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 RPLP0P05388 317 aaKnown RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 NR2F6P10588 404 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ALOX12P18054 663 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ZNF10P21506 573 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 NTSP30990 170 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ST13P50502 369 aaKnown RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 MANFP55145 182 aaKnown RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 TPD52P55327 224 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 ARPC4P59998 168 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 BTN3A2P78410 334 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 CCL7P80098 99 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 DUSP2Q05923 314 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 RFX4Q33E94 735 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.3□□□□□ -1.08
DDB1-213ENST00000539332 GCNT6Q5T4J0 391 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 C18orf63Q68DL7 685 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 CBLL1Q75N03 491 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 DGLUCYQ7Z3D6 616 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 SLCO6A1Q86UG4 719 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ARMC8Q8IUR7 673 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 CLEC4FQ8N1N0 589 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 CSNK1A1LQ8N752 337 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ZNF566Q969W8 418 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 FAM162AQ96A26 154 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 FKBP10Q96AY3 582 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 TCTN2Q96GX1 697 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 CENPOQ9BU64 300 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 FUNDC2Q9BWH2 189 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 CHID1Q9BWS9 393 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 UGT2B28Q9BY64 529 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 NLNQ9BYT8 704 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 USE1Q9NZ43 259 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 UTS2RQ9UKP6 389 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ACSL6Q9UKU0 697 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 MRPS2Q9Y399 296 aaKnown RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 C4orf47A7E2U8 309 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 TMEM229AB2RXF0 380 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 TAF4O00268 1085 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 B3GALT2O43825 422 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 TPST1O60507 370 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 SRPX2O60687 465 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 PRKRAO75569 313 aaKnown RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 GCM2O75603 506 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 LDOC1O95751 146 aaPredicted RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 SERPINA1P01009 418 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 IFI6P09912 130 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 NUDT7P0C024 238 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 CCDC159P0C7I6 412 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 ETFAP13804 333 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 KDELR2P33947 212 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 LIM2P55344 173 aa8.3□□□□□ -1.08
DDB1-213ENST00000539332 PCBP3P57721 371 aaKnown RBP8.3□□□□□ -1.08
DDB1-213ENST00000539332 CHRNB3Q05901 458 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms