RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 FOXS1O43638 330 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 TMPRSS11DO60235 418 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 PRMT3O60678 531 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 SEC24DO94855 1032 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 SCELO95171 688 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 NR2F6P10588 404 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 RNH1P13489 461 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 ZNF24P17028 368 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 PRPS1L1P21108 318 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 TACR1P25103 407 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 ADSLP30566 484 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 DGKQP52824 942 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 LIM2P55344 173 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 HNRNPH2P55795 449 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 CLDN8P56748 225 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 RAB38P57729 211 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 UFM1P61960 85 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 ACTN3Q08043 901 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 PMPCAQ10713 525 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 TERF2Q15554 542 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 MAPRE2Q15555 327 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 MEP1AQ16819 746 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 PGS1Q32NB8 556 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 AGKQ53H12 422 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 ZNF468Q5VIY5 522 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 PAOXQ6QHF9 649 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 PDSS2Q86YH6 399 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 ZZZ3Q8IYH5 903 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 SHISA5Q8N114 240 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 CA13Q8N1Q1 262 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 FAM47BQ8NA70 645 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 OR5T3Q8NGG3 340 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 PPCDCQ96CD2 204 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 PEX11GQ96HA9 241 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 MAPKAP1Q9BPZ7 522 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 BRINP2Q9C0B6 783 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 CLK4Q9HAZ1 481 aaKnown RBP11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 MKKSQ9NPJ1 570 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 SAR1AQ9NR31 198 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 SDR39U1Q9NRG7 319 aaPredicted RBP11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 GIMAP4Q9NUV9 329 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 ATAD3AQ9NVI7 634 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 CCDC167Q9P0B6 97 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 SH3BP4Q9P0V3 963 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 ARMCX1Q9P291 453 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 PSME2Q9UL46 239 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 DAPP1Q9UN19 280 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 GPR45Q9Y5Y3 372 aa11.56□□□□□ -0.56
CLSTN3-208ENST00000538933 C1orf226A1L170 272 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 NME2P1O60361 137 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 ATE1O95260 518 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 C8orf89P0DMQ9 161 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 NME2P22392 152 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 PIK3R1P27986 724 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 XCR1P46094 333 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 NR0B1P51843 470 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 NUP107P57740 925 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 MAT1AQ00266 395 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 TNFRSF17Q02223 184 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 KLF10Q13118 480 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 RUNX2Q13950 521 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 SYT16Q17RD7 645 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 DPY19L1Q2PZI1 675 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 DEFB113Q30KQ7 82 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 BTBD16Q32M84 506 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 MMEL1Q495T6 779 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 NDUFAF5Q5TEU4 345 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 LANCL3Q6ZV70 420 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 TRPM8Q7Z2W7 1104 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 CPEB2Q7Z5Q1 589 aaKnown RBP11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 KRTCAP2Q8N6L1 136 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 GLB1L3Q8NCI6 653 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 OR51Q1Q8NH59 317 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 TM4SF18Q96CE8 201 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 C11orf24Q96F05 449 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 EGLN2Q96KS0 407 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 RBCK1Q9BYM8 510 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 TP63Q9H3D4 680 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 REEP4Q9H6H4 257 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 PLSCR2Q9NRY7 297 aa11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 TEX10Q9NXF1 929 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 NUP214P35658 2090 aaPredicted RBP11.55□□□□□ -0.56
CLSTN3-208ENST00000538933 GABRR3A8MPY1 467 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 EBAG9O00559 213 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 CLDN4O14493 209 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 SCAMP2O15127 329 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 SLC22A2O15244 555 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 ERAL1O75616 437 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 AIFM1O95831 613 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 DDCP20711 480 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 IL10P22301 178 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 GPX3P22352 226 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 JAK1P23458 1154 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 S100A3P33764 101 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 POLR2JP52435 117 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 SNRPNP63162 240 aaKnown RBP11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 MAPKAPK3Q16644 382 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 MINDY4Q4G0A6 757 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 CMPK2Q5EBM0 449 aa11.54□□□□□ -0.56
CLSTN3-208ENST00000538933 CPTPQ5TA50 214 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms