RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CORO7P57737 925 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FOXL2P58012 376 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RPS18P62269 152 aaKnown RBP9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 POU6F2P78424 691 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 VMACQ2NL98 169 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 BTBD16Q32M84 506 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 LRRC23Q53EV4 343 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 IRAK1BP1Q5VVH5 260 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 REEP3Q6NUK4 255 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CDC73Q6P1J9 531 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 C8orf82Q6P1X6 216 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DGAT2L6Q6ZPD8 337 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FKBP9P1Q75LS8 142 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 WDR53Q7Z5U6 358 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SPPL2CQ8IUH8 684 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FAM13CQ8NE31 585 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR5D16Q8NGK9 328 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR5L2Q8NGL0 311 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PTPMT1Q8WUK0 201 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 LZICQ8WZA0 190 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 C8orf44Q96CB5 159 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ASB9Q96DX5 294 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 VMP1Q96GC9 406 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FBXL20Q96IG2 436 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SPSB2Q99619 263 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SPATA5L1Q9BVQ7 753 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DEFB126Q9BYW3 111 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 IKZF5Q9H5V7 419 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FOLH1BQ9HBA9 442 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 Q9N2J8 555 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ADPRHL2Q9NX46 363 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CD300AQ9UGN4 299 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 RPS6KA6Q9UK32 745 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 BAG5Q9UL15 447 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 LIPT1Q9Y234 373 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 POMPQ9Y244 141 aa9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HEMK1Q9Y5R4 338 aaPredicted RBP9.93□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SPTBN2O15020 2390 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 IGKV3D-11A0A0A0MRZ8 115 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 A0A1W2PNU3 283 aaPredicted RBP9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SAGE2PA6NJ88 616 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HS6ST1O60243 411 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZFAND5O76080 213 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 IFI6P09912 130 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 LIPCP11150 499 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ICAM2P13598 275 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MMP11P24347 488 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PTPN6P29350 595 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 AQP1P29972 269 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PSMD4P55036 377 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 POLE2P56282 527 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NRG3P56975 720 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DCAF7P61962 342 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 AP2B1P63010 937 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 KPNB1Q14974 876 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 EXT1Q16394 746 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SWT1Q5T5J6 900 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MFSD12Q6NUT3 480 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PGM2L1Q6PCE3 622 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HSDL2Q6YN16 418 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZZZ3Q8IYH5 903 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 METTL25Q8N6Q8 603 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 B3GNT7Q8NFL0 401 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR1N1Q8NGS0 311 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CDS1Q92903 461 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NKD1Q969G9 470 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 POP5Q969H6 163 aaKnown RBP9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MAL2Q969L2 176 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TPD52L3Q96J77 140 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FAM117AQ9C073 453 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PIGUQ9H490 435 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 EPS8L2Q9H6S3 715 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ACTR3BQ9P1U1 418 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ZNF232Q9UNY5 417 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 AURKCQ9UQB9 309 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ERVK-11Q9UQG0 969 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 V9GYQ6 96 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 DMXL1Q9Y485 3027 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CCDC88CQ9P219 2028 aa9.92□□□□□ -0.82
TNFRSF1A-211ENST00000538363 TRBV11-1A0A0K0K1C0 115 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 LOC101059948A0A1B0GTJ6 334 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 OR6C76A6NM76 312 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HRKO00198 91 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ARPC2O15144 300 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 ASNA1O43681 348 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CNOT3O75175 753 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 NME6O75414 186 aaPredicted RBP9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 REM1O75628 298 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CREG1O75629 220 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 SORBS2O94875 1100 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 BAG2O95816 211 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 CBX7O95931 251 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 AK1P00568 194 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 HPGDP15428 266 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 GGT1P19440 569 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PSMA4P25789 261 aaKnown RBP9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 IL12BP29460 328 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 PCGF2P35227 344 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 MGAT2Q10469 447 aa9.91□□□□□ -0.82
TNFRSF1A-211ENST00000538363 FUT7Q11130 342 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms