RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 NXPE3Q969Y0 559 aa13.26□□□□□ -0.29
CLPB-209ENST00000538039 FAM46AQ96IP4 442 aaKnown RBP13.26□□□□□ -0.29
CLPB-209ENST00000538039 ARHGAP9Q9BRR9 750 aa13.26□□□□□ -0.29
CLPB-209ENST00000538039 ENOPH1Q9UHY7 261 aa13.26□□□□□ -0.29
CLPB-209ENST00000538039 IGKV1-8A0A0C4DH67 115 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 A0A1W2PPV9 198 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 LATO43561 262 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 FUT1P19526 365 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 XPAP23025 273 aaPredicted RBP13.25□□□□□ -0.29
CLPB-209ENST00000538039 BUD31P41223 144 aaPredicted RBP13.25□□□□□ -0.29
CLPB-209ENST00000538039 TPBGQ13641 420 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 C1DQ13901 141 aaKnown RBP13.25□□□□□ -0.29
CLPB-209ENST00000538039 DDI2Q5TDH0 399 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 LILRA6Q6PI73 481 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 TMEM91Q6ZNR0 172 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 GDPD1Q8N9F7 314 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 SMAP2Q8WU79 429 aaPredicted RBP13.25□□□□□ -0.29
CLPB-209ENST00000538039 SNAPC3Q92966 411 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 ARRDC3Q96B67 414 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 CITED4Q96RK1 184 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 FNDC11Q9BVV2 318 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 C11orf49Q9H6J7 331 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 C6orf106Q9H6K1 298 aaPredicted RBP13.25□□□□□ -0.29
CLPB-209ENST00000538039 RPRD1BQ9NQG5 326 aaKnown RBP13.25□□□□□ -0.29
CLPB-209ENST00000538039 SEMA4GQ9NTN9 838 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 FAM183AA6NL82 134 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 KIAA0355O15063 1070 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 HYAL3O43820 417 aaPredicted RBP13.25□□□□□ -0.29
CLPB-209ENST00000538039 LRG1P02750 347 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 YES1P07947 543 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 SLC2A2P11168 524 aaPredicted RBP13.25□□□□□ -0.29
CLPB-209ENST00000538039 RNF144AP50876 292 aaPredicted RBP13.25□□□□□ -0.29
CLPB-209ENST00000538039 RAB8AP61006 207 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 ABATP80404 500 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 FAM27D1Q5T7N8 215 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 IKBIPQ70UQ0 350 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 DGLUCYQ7Z3D6 616 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 VRK2Q86Y07 508 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 LINC01555Q8NAE3 123 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 ANKK1Q8NFD2 765 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 TIMP4Q99727 224 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 IRF2BPLQ9H1B7 796 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 MCUBQ9NWR8 336 aa13.25□□□□□ -0.29
CLPB-209ENST00000538039 NARSO43776 548 aaKnown RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 AKAP8O43823 692 aaKnown RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 PIP5K1CO60331 668 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 PAHP00439 452 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 NR2F1P10589 423 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 ACP2P11117 423 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 CELP19835 753 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 MLLT3P42568 568 aaPredicted RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 STXBP1P61764 594 aaKnown RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 PIP5KL1Q5T9C9 394 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 CD200R1LQ6Q8B3 271 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 RFPL4BQ6ZWI9 263 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 TRILQ7L0X0 811 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 NKAIN4Q8IVV8 208 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 TMEM163Q8TC26 289 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 AMDHD1Q96NU7 426 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 NFKBIL1Q9UBC1 381 aaPredicted RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 CASKO14936 926 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 SERPIND1P05546 499 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 TRIM23P36406 574 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 MAP2K3P46734 347 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 MTNR1AP48039 350 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 EVX1P49640 407 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 LASP1Q14847 261 aaKnown RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 SMUG1Q53HV7 270 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 C3orf38Q5JPI3 329 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 ENTPD8Q5MY95 495 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 EOGTQ5NDL2 527 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 SLC25A30Q5SVS4 291 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 KIAA1161Q6NSJ0 714 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 HSDL2Q6YN16 418 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 RIPOR3Q96MK2 946 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 C17orf62Q9BQA9 187 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 ENKD1Q9H0I2 346 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 TRPV5Q9NQA5 729 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 CPSF4LA6NMK7 179 aaKnown RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 HIDE1A8MVS5 230 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 PRRT4C9JH25 899 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 STK25O00506 426 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 GNSP15586 552 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 RPL3P39023 403 aaKnown RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 CLDN2P57739 230 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 ALDH6A1Q02252 535 aaKnown RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.24□□□□□ -0.29
CLPB-209ENST00000538039 IL18Q14116 193 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 CD300LDQ6UXZ3 194 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 KIAA0907Q7Z7F0 614 aaPredicted RBP13.24□□□□□ -0.29
CLPB-209ENST00000538039 LRRTM4Q86VH4 590 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 IL17RCQ8NAC3 791 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 OR4M2Q8NGB6 313 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 ENKURQ8TC29 256 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 ARMC5Q96C12 935 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 ART5Q96L15 291 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 WACQ9BTA9 647 aa13.24□□□□□ -0.29
CLPB-209ENST00000538039 DPH7Q9BTV6 452 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms