RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ADCY4Q8NFM4 1077 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 OR7G1Q8NGA0 311 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 C16orf78Q8WTQ4 265 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SIKE1Q9BRV8 207 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 BRINP2Q9C0B6 783 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 IL1RL2Q9HB29 575 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GIMAP2Q9UG22 337 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ADGRG4Q8IZF6 3080 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MED12Q93074 2177 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GOLGA8QA0A0J9YX86 632 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GOLGA8OA6NCC3 632 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GOLGA8NF8WBI6 632 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PRRG2O14669 202 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ADAM10O14672 748 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TROVE2P10155 538 aaKnown RBP eCLIP16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DRD2P14416 443 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LBPP18428 481 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GPX3P22352 226 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EPHA3P29320 983 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MAGEA5P43359 124 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 AQP5P55064 265 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EXOSC7Q15024 291 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LTB4RQ15722 352 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PRAMEF20Q5VT98 475 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ARHGAP11AQ6P4F7 1023 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 C3P1Q6ZMU1 363 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ACAD11Q709F0 780 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LARP4Q71RC2 724 aaKnown RBP eCLIP16.43■□□□□ 0.221e-7■□□□□ 11.3
TNFRSF1A-209ENST00000536717 MAVSQ7Z434 540 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TAGAPQ8N103 731 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LRRC25Q8N386 305 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FBXW8Q8N3Y1 598 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TMEM251Q8N6I4 163 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 C17orf47Q8NEP4 570 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FAM57AQ8TBR7 257 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FCRL1Q96LA6 429 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF317Q96PQ6 595 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 WDR55Q9H6Y2 383 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NPHS2Q9NP85 383 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EIF3LQ9Y262 564 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 HRH3Q9Y5N1 445 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LIPGQ9Y5X9 500 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF780BQ9Y6R6 833 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TEX15Q9BXT5 2789 aa16.43■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CBX7O95931 251 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LSP1P33241 339 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GNGT1P63211 74 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MRPS35P82673 323 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EMX2Q04743 252 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SLC9B1Q4ZJI4 515 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TRMT12Q53H54 448 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 HLA-DQA1Q5Y7H0 255 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NXNQ6DKJ4 435 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EPGNQ6UW88 154 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 RPTNQ6XPR3 784 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CD163Q86VB7 1156 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FAM109AQ8N4B1 249 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 OR5M3Q8NGP4 307 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CEP70Q8NHQ1 597 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CDC26Q8NHZ8 85 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CHMP6Q96FZ7 201 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MAELQ96JY0 434 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DMRTA2Q96SC8 542 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 C1orf50Q9BV19 199 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NOP53Q9NZM5 478 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CNIH4Q9P003 139 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CNOT11Q9UKZ1 510 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 WBP11Q9Y2W2 641 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NPFFR2Q9Y5X5 522 aa16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-209ENST00000536717 INTS1Q8N201 2190 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NUP214P35658 2090 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LRATO95237 230 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 IGHG3P01860 377 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TPOP07202 933 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CELA3AP09093 270 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PRPS2P11908 318 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FBXW4P57775 412 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ART3Q13508 389 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 HEPACAMQ14CZ8 416 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 RPS6KA2Q15349 733 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CEBPEQ15744 281 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 IL23RQ5VWK5 629 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 OGFOD2Q6N063 350 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CCDC116Q8IYX3 515 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.41■□□□□ 0.223e-15■■■■■ 32.4
TNFRSF1A-209ENST00000536717 ACTRT2Q8TDY3 377 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EXOSC8Q96B26 276 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 THOC1Q96FV9 657 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ITPAQ9BY32 194 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NXF5Q9H1B4 397 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 BCAP29Q9UHQ4 241 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DCTN4Q9UJW0 460 aa16.41■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PRSS44E7EML9 344 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 E9PLN8 166 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 BCKDHAP12694 445 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PCSK2P16519 638 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SDC1P18827 310 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ASMTP46597 345 aa16.4■□□□□ 0.22
TNFRSF1A-209ENST00000536717 IDH3AP50213 366 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms