RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 SEC24CP53992 1094 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 CASP6P55212 293 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 GNGT1P63211 74 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 MAD2L1Q13257 205 aaPredicted RBP16.55■□□□□ 0.24
CCDC61-201ENST00000536603 PDE7AQ13946 482 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF791Q3KP31 576 aaPredicted RBP16.55■□□□□ 0.24
CCDC61-201ENST00000536603 R3HCC1LQ7Z5L2 792 aaKnown RBP16.55■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF808Q8N4W9 903 aaPredicted RBP16.55■□□□□ 0.24
CCDC61-201ENST00000536603 GOLM1Q8NBJ4 401 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 C17orf47Q8NEP4 570 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 ERP27Q96DN0 273 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 SPACA9Q96E40 222 aaPredicted RBP16.55■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF764Q96H86 408 aaPredicted RBP16.55■□□□□ 0.24
CCDC61-201ENST00000536603 FRMD6Q96NE9 622 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 AMDHD1Q96NU7 426 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 ITPAQ9BY32 194 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 NXF5Q9H1B4 397 aaKnown RBP16.55■□□□□ 0.24
CCDC61-201ENST00000536603 DEPPQ9NTK1 212 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 FGFR1OP2Q9NVK5 253 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 MYO7BQ6PIF6 2116 aa16.55■□□□□ 0.24
CCDC61-201ENST00000536603 PDPK1O15530 556 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 PLOD3O60568 738 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 WISP2O76076 250 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 VIMP08670 466 aaKnown RBP16.54■□□□□ 0.24
CCDC61-201ENST00000536603 CCL3P10147 92 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 HPCAL1P37235 193 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 MC3RP41968 323 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 NRG3P56975 720 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 ALDH6A1Q02252 535 aaKnown RBP16.54■□□□□ 0.24
CCDC61-201ENST00000536603 NNATQ16517 81 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 SMU1Q2TAY7 513 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 TMEM107Q6UX40 140 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 BNC2Q6ZN30 1099 aaPredicted RBP16.54■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF551Q7Z340 670 aaPredicted RBP16.54■□□□□ 0.24
CCDC61-201ENST00000536603 KRTCAP2Q8N6L1 136 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 FAM13CQ8NE31 585 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 OR5M3Q8NGP4 307 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 MTERF3Q96E29 417 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 THOC1Q96FV9 657 aaKnown RBP16.54■□□□□ 0.24
CCDC61-201ENST00000536603 MAGED4Q96JG8 741 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 LCORQ96JN0 433 aaPredicted RBP16.54■□□□□ 0.24
CCDC61-201ENST00000536603 MEAF6Q9HAF1 191 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 RYDENQ9NUL5 291 aaKnown RBP16.54■□□□□ 0.24
CCDC61-201ENST00000536603 NOP53Q9NZM5 478 aaKnown RBP16.54■□□□□ 0.24
CCDC61-201ENST00000536603 ATP6V1HQ9UI12 483 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 ADAM21Q9UKJ8 722 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 NPFFR2Q9Y5X5 522 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 APCP25054 2843 aa16.54■□□□□ 0.24
CCDC61-201ENST00000536603 G3V3Y1 287 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 PLOD2O00469 737 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 SCAMP2O15127 329 aaKnown RBP16.53■□□□□ 0.24
CCDC61-201ENST00000536603 P04436 131 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 G6PDP11413 515 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 ESRRAP11474 423 aaPredicted RBP16.53■□□□□ 0.24
CCDC61-201ENST00000536603 CNR1P21554 472 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 RPL3P39023 403 aaKnown RBP16.53■□□□□ 0.24
CCDC61-201ENST00000536603 RFC3P40938 356 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 MANFP55145 182 aaKnown RBP16.53■□□□□ 0.24
CCDC61-201ENST00000536603 DCAF7P61962 342 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 HSPB3Q12988 150 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.53■□□□□ 0.24
CCDC61-201ENST00000536603 RNFT1Q5M7Z0 435 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 SLC22A10Q63ZE4 541 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 RPTNQ6XPR3 784 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 DND1Q8IYX4 353 aaKnown RBP16.53■□□□□ 0.24
CCDC61-201ENST00000536603 PRR22Q8IZ63 422 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 OR7A2PQ8NGA2 310 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 OR10G3Q8NGC4 313 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 PIWIL2Q8TC59 973 aaKnown RBP16.53■□□□□ 0.24
CCDC61-201ENST00000536603 NUDT8Q8WV74 236 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 ELP4Q96EB1 424 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 ZBED6CLQ96FA7 236 aaPredicted RBP16.53■□□□□ 0.24
CCDC61-201ENST00000536603 LURAP1Q96LR2 239 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 TSPAN10Q9H1Z9 355 aaPredicted RBP16.53■□□□□ 0.24
CCDC61-201ENST00000536603 SACM1LQ9NTJ5 587 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 TAS2R9Q9NYW1 312 aa16.53■□□□□ 0.24
CCDC61-201ENST00000536603 A0A087WV62 115 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 CAPN14A8MX76 684 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 NPIPA5E9PKD4 350 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 UPK1AO00322 258 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 HDAC3O15379 428 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 SLITRK5O94991 958 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 DDX5P17844 614 aaKnown RBP16.52■□□□□ 0.24
CCDC61-201ENST00000536603 LBPP18428 481 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 EFNA1P20827 205 aaPredicted RBP16.52■□□□□ 0.24
CCDC61-201ENST00000536603 DRD5P21918 477 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 ABCD3P28288 659 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 GPC1P35052 558 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 CA7P43166 264 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 PPICP45877 212 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 DIO3P55073 304 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 SF3A3Q12874 501 aaKnown RBP eCLIP16.52■□□□□ 0.249e-7■■■■■ 44.5
CCDC61-201ENST00000536603 NTRK2Q16620 822 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 ZNF630Q2M218 657 aaPredicted RBP16.52■□□□□ 0.24
CCDC61-201ENST00000536603 LARP4Q71RC2 724 aaKnown RBP eCLIP16.52■□□□□ 0.24
CCDC61-201ENST00000536603 POGLUT1Q8NBL1 392 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 OR2M7Q8NG81 312 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 RFWD2Q8NHY2 731 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 PAQR8Q8TEZ7 354 aa16.52■□□□□ 0.24
CCDC61-201ENST00000536603 HSPBAP1Q96EW2 488 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms