RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 ZNF441Q8N8Z8 693 aa12.5□□□□□ -0.41
RPAIN-205ENST00000536255 NR4A3Q92570 626 aa12.5□□□□□ -0.41
RPAIN-205ENST00000536255 ADIPOR1Q96A54 375 aa12.5□□□□□ -0.41
RPAIN-205ENST00000536255 HSPBAP1Q96EW2 488 aa12.5□□□□□ -0.41
RPAIN-205ENST00000536255 THOC1Q96FV9 657 aaKnown RBP12.5□□□□□ -0.41
RPAIN-205ENST00000536255 MAGED4Q96JG8 741 aa12.5□□□□□ -0.41
RPAIN-205ENST00000536255 LCORQ96JN0 433 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-205ENST00000536255 SGCZQ96LD1 299 aa12.5□□□□□ -0.41
RPAIN-205ENST00000536255 ITPAQ9BY32 194 aa12.5□□□□□ -0.41
RPAIN-205ENST00000536255 FAM120CQ9NX05 1096 aaKnown RBP12.5□□□□□ -0.41
RPAIN-205ENST00000536255 PRSS51A0A1B0GVH4 220 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 FRG2CA6NGY1 282 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 UPK1AO00322 258 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 EMC8O43402 210 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 NME2P1O60361 137 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 ERN1O75460 977 aaKnown RBP12.49□□□□□ -0.41
RPAIN-205ENST00000536255 C6orf47O95873 294 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 IL6P05231 212 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 DRD5P21918 477 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 NME2P22392 152 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 SOX18P35713 384 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 SOX3P41225 446 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 PPICP45877 212 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 MRPL19P49406 292 aaKnown RBP12.49□□□□□ -0.41
RPAIN-205ENST00000536255 PMP22Q01453 160 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 SRSF1Q07955 248 aaKnown RBP eCLIP12.49□□□□□ -0.41
RPAIN-205ENST00000536255 ZNF155Q12901 538 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-205ENST00000536255 DUSP8Q13202 625 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 EIF2S3LQ2VIR3 472 aaKnown RBP12.49□□□□□ -0.41
RPAIN-205ENST00000536255 FAM174BQ3ZCQ3 159 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 SPANXN4Q5MJ08 99 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 OR4F3Q6IEY1 312 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 SLC25A25Q6KCM7 469 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 BHLHB9Q6PI77 547 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 IL20RBQ6UXL0 311 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 SZRD1Q7Z422 152 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 GALNTL5Q7Z4T8 443 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 FAM26EQ8N5C1 309 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 FAM98AQ8NCA5 519 aaKnown RBP12.49□□□□□ -0.41
RPAIN-205ENST00000536255 DNAJB8Q8NHS0 232 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 PSMA8Q8TAA3 256 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 MOAP1Q96BY2 351 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 SPACA9Q96E40 222 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-205ENST00000536255 MARK4Q96L34 752 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 BTBD9Q96Q07 612 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 RABEP2Q9H5N1 569 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 FOLH1BQ9HBA9 442 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 TIMMDC1Q9NPL8 285 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 MRGBPQ9NV56 204 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 TMEM45AQ9NWC5 275 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 NTMQ9P121 344 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 SNX8Q9Y5X2 465 aa12.49□□□□□ -0.41
RPAIN-205ENST00000536255 ASPDHA6ND91 283 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 OR6B1O95007 311 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 PSMG1O95456 288 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 PGRP06401 933 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 ABCB1P08183 1280 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 EFNA1P20827 205 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 CDK9P50750 372 aaKnown RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 ATP4BP51164 291 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 TDGF1P3P51864 188 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 RPP38P78345 283 aaKnown RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 UBAP2LQ14157 1087 aaKnown RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 SQLEQ14534 574 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 MAPKAPK3Q16644 382 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 SPDYE7PQ495Y7 208 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 VPS26BQ4G0F5 336 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 METTL21CQ5VZV1 264 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 ZCCHC12Q6PEW1 402 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 TMEM64Q6YI46 380 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 RTL4Q6ZR62 310 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 GOLM1Q8NBJ4 401 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 SIMC1Q8NDZ2 872 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 NUP43Q8NFH3 380 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 OR56A1Q8NGH5 318 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 RFWD2Q8NHY2 731 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 PRR7Q8TB68 274 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 SFXN5Q8TD22 340 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 CHMP6Q96FZ7 201 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 TEX37Q96LM6 180 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 VSTM2LQ96N03 204 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 FRMD6Q96NE9 622 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 MS4A4EQ96PG1 132 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 ZNF317Q96PQ6 595 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 OR52E6Q96RD3 313 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 NXF5Q9H1B4 397 aaKnown RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 ANKRA2Q9H9E1 313 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 ZCCHC3Q9NUD5 404 aaKnown RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 DTX4Q9Y2E6 619 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 GPR55Q9Y2T6 319 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 KLF13Q9Y2Y9 288 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-205ENST00000536255 NPFFR2Q9Y5X5 522 aa12.48□□□□□ -0.41
RPAIN-205ENST00000536255 FAM234BA2RU67 622 aa12.47□□□□□ -0.41
RPAIN-205ENST00000536255 TP53I11O14683 189 aa12.47□□□□□ -0.41
RPAIN-205ENST00000536255 TO15178 435 aa12.47□□□□□ -0.41
RPAIN-205ENST00000536255 SOX30O94993 753 aa12.47□□□□□ -0.41
RPAIN-205ENST00000536255 NADKO95544 446 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-205ENST00000536255 KRT16P08779 473 aa12.47□□□□□ -0.41
RPAIN-205ENST00000536255 FBXO45P0C2W1 286 aa12.47□□□□□ -0.41
RPAIN-205ENST00000536255 NAGAP17050 411 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms