RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 GPAT4Q86UL3 456 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 RAB42Q8N4Z0 105 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 HERVK_113Q902F9 699 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 SUSD6Q92537 303 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 RIT1Q92963 219 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 NIPSNAP1Q9BPW8 284 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 MS4A8Q9BY19 250 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 MIXL1Q9H2W2 232 aa16.94■□□□□ 0.3
RAB40C-203ENST00000535977 PRRC2BQ5JSZ5 2229 aaKnown RBP16.94■□□□□ 0.3
RAB40C-203ENST00000535977 PRAMEF33A0A0G2JMD5 474 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 PRAMEF25A6NGN4 478 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 GPR89AB7ZAQ6 455 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 C5orf67F2Z3F1 127 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 PLPP1O14494 284 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 PRAMEF10O60809 474 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 GPR89BP0CG08 455 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 TNFRSF1BP20333 461 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 IDH2P48735 452 aaKnown RBP16.93■□□□□ 0.3
RAB40C-203ENST00000535977 MANFP55145 182 aaKnown RBP16.93■□□□□ 0.3
RAB40C-203ENST00000535977 RUNX1T1Q06455 604 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 METRNLQ641Q3 311 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 KLHL17Q6TDP4 642 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 CEACAM20Q6UY09 585 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 ABI3BPQ7Z7G0 1075 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 SLC44A2Q8IWA5 706 aaPredicted RBP16.93■□□□□ 0.3
RAB40C-203ENST00000535977 GPALPP1Q8IXQ4 340 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 TM4SF18Q96CE8 201 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 CXorf36Q9H7Y0 433 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 RLIMQ9NVW2 624 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 ZNF226Q9NYT6 803 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 CNOT2Q9NZN8 540 aaKnown RBP16.93■□□□□ 0.3
RAB40C-203ENST00000535977 KCND3Q9UK17 655 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 DUSP12Q9UNI6 340 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 KIAA1549LQ6ZVL6 1849 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 FABP7O15540 132 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 TSPAN19P0C672 248 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 TRA2BP62995 288 aaKnown RBP16.93■□□□□ 0.3
RAB40C-203ENST00000535977 PRSS53Q2L4Q9 553 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 UTP15Q8TED0 518 aaKnown RBP16.93■□□□□ 0.3
RAB40C-203ENST00000535977 IL17FQ96PD4 163 aa16.93■□□□□ 0.3
RAB40C-203ENST00000535977 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 RPS10-NUDT3A0A1W2PQS6 291 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 BSGP35613 385 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 FRKP42685 505 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-203ENST00000535977 MAP2K6P52564 334 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 REEP5Q00765 189 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 IKZF1Q13422 519 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 ANGPT1Q15389 498 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 LCN1P1Q5VSP4 162 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 CFAP77Q6ZQR2 320 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 TAGAPQ8N103 731 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 SMG7Q92540 1137 aaKnown RBP16.92■□□□□ 0.3
RAB40C-203ENST00000535977 RGMAQ96B86 450 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 UPRTQ96BW1 309 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 RSPRY1Q96DX4 576 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 GIMAP5Q96F15 307 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 ZBED6CLQ96FA7 236 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-203ENST00000535977 DIRAS2Q96HU8 199 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 NLKQ9UBE8 527 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 DENND4AQ7Z401 1863 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 M0R129 80 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 ARSBP15848 533 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 P2RY2P41231 377 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 VIPR2P41587 438 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 ALDH9A1P49189 494 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 SMIM11AP58511 58 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 MLC1Q15049 377 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 WSCD2Q2TBF2 565 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 GAB4Q2WGN9 574 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 OR52H1Q8NGJ2 320 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 ACSS1Q9NUB1 689 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-203ENST00000535977 CXXC1Q9P0U4 656 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-203ENST00000535977 TAC3Q9UHF0 121 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 ACSL5Q9ULC5 683 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 TMCC3Q9ULS5 477 aa16.92■□□□□ 0.3
RAB40C-203ENST00000535977 NDRG2Q9UN36 371 aaKnown RBP16.92■□□□□ 0.3
RAB40C-203ENST00000535977 A0A1W2PRG6 482 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 HEPACAM2A8MVW5 462 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 PCDH17O14917 1159 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 CCT3P49368 545 aaKnown RBP16.91■□□□□ 0.3
RAB40C-203ENST00000535977 PDGFRLQ15198 375 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 LMNTD1Q8N9Z9 388 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 ZNF431Q8TF32 576 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-203ENST00000535977 KLHL15Q96M94 604 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 TAPBPLQ9BX59 468 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 HEXA-AS1Q9H8Q6 139 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 CLN6Q9NWW5 311 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 ZSCAN32Q9NX65 697 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 OBP2AQ9NY56 170 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 ADAP00813 363 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 RAF1P04049 648 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 MXD1Q05195 221 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 BAMBIQ13145 260 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 GRK1Q15835 563 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 NUDT13Q86X67 352 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 SLC37A3Q8NCC5 494 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 B3GNT7Q8NFL0 401 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 ST8SIA4Q92187 359 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 ZNF607Q96SK3 696 aa16.91■□□□□ 0.3
RAB40C-203ENST00000535977 ZAR1LA6NP61 321 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms