RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 MARCH9Q86YJ5 346 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 UNC45BQ8IWX7 931 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 RCOR2Q8IZ40 523 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 LRRC52Q8N7C0 313 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 OR6C4Q8NGE1 309 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 OR10G8Q8NGN5 311 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 OR2T34Q8NGX1 318 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 OR2T3Q8NH03 318 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 VANGL1Q8TAA9 524 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-202ENST00000535689 GDAP1Q8TB36 358 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 MAPK15Q8TD08 544 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 SSC4DQ8WTU2 575 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 ZFAND2BQ8WV99 257 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 ZNRF4Q8WWF5 429 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 CKAP2Q8WWK9 683 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 FCAMRQ8WWV6 532 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 NSMAFQ92636 917 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 BIRC7Q96CA5 298 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 ALG14Q96F25 216 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 MAP3K3Q99759 626 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 OMDQ99983 421 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 FUCA2Q9BTY2 467 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 RBM4Q9BWF3 364 aaKnown RBP2.92□□□□□ -1.94
SNHG1-202ENST00000535689 TRIM4Q9C037 500 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 CXCL16Q9H2A7 254 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 C10orf88Q9H8K7 445 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 ZDHHC18Q9NUE0 388 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 ELOVL2Q9NXB9 296 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 GDAP2Q9NXN4 497 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 DDX43Q9NXZ2 648 aaKnown RBP2.92□□□□□ -1.94
SNHG1-202ENST00000535689 ARMCX3Q9UH62 379 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-202ENST00000535689 ELF5Q9UKW6 265 aaPredicted RBP2.92□□□□□ -1.94
SNHG1-202ENST00000535689 RP1P56715 2156 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 PLXNA2O75051 1894 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 NIPBLQ6KC79 2804 aaeCLIP2.92□□□□□ -1.948e-27■■■■□ 21.5
SNHG1-202ENST00000535689 TRPM6Q9BX84 2022 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 NBASA2RRP1 2371 aa2.92□□□□□ -1.94
SNHG1-202ENST00000535689 A0A087WW49 117 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ILVBLA1L0T0 632 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 NKX6-3A6NJ46 265 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 WASH3PC4AMC7 463 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 NEDD8-MDP1E9PL57 170 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 PRAMEF26H0Y7S4 382 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 SLC16A4O15374 487 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 SCO2O43819 266 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 SLC37A4O43826 429 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 CSO75390 466 aaKnown RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 SLCO2B1O94956 709 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 TNFSF15O95150 251 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 NXPH2O95156 264 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 OLFM2O95897 454 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 OAS1P00973 400 aaKnown RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 YES1P07947 543 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 CXCL8P10145 99 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ERVK-10P10266 1014 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 LIPCP11150 499 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 RALAP11233 206 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ADRA2CP18825 462 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 AADACP22760 399 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 CCT6AP40227 531 aaKnown RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 WNT5AP41221 380 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 IER3P46695 156 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 SNU13P55769 128 aaKnown RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 MTCP1P56278 107 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 EVCP57679 992 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 STX1BP61266 288 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 IRX6P78412 446 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 PPARDQ03181 441 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 MZT1Q08AG7 82 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 KLRB1Q12918 225 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 TAF10Q12962 218 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 TNK1Q13470 666 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 TUBB2AQ13885 445 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 MORF4L2Q15014 288 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ISXQ2M1V0 245 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 MPPE1Q53F39 396 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 XKR6Q5GH73 641 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ZNF776Q68DI1 518 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ADAM5Q6NVV9 412 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 TIPARPQ7Z3E1 657 aaKnown RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 GPR141Q7Z602 305 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 CCDC91Q7Z6B0 441 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 RTN4RL2Q86UN3 420 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 TMEM25Q86YD3 366 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 KIRREL3Q8IZU9 778 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 CSGALNACT2Q8N6G5 542 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 MAPKAPK5-AS1Q8N8E1 139 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 WDSUB1Q8N9V3 476 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ZNF383Q8NA42 475 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ZBTB8BQ8NAP8 495 aaPredicted RBP2.91□□□□□ -1.94
SNHG1-202ENST00000535689 OR7A2PQ8NGA2 310 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 OR10T2Q8NGX3 314 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 OR4C6Q8NH72 309 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 HPSE2Q8WWQ2 592 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 TMEM190Q8WZ59 177 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 NAT6Q93015 286 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 CFAP36Q96G28 342 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 ANKRD36BP1Q96IX9 119 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 SERAC1Q96JX3 654 aa2.91□□□□□ -1.94
SNHG1-202ENST00000535689 LINC00615Q96LM1 132 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms