RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 EXO1Q9UQ84 846 aaKnown RBP20.14■□□□□ 0.81
SSPN-204ENST00000535504 A0A1W2PRB8 838 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 G3V3Y1 287 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 CFLARO15519 480 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 HS6ST1O60243 411 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 ZNF354AO60765 605 aaPredicted RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 REM1O75628 298 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 MST1P26927 711 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 TDGF1P3P51864 188 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 PSMD4P55036 377 aaKnown RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 CLDN8P56748 225 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 FBXW4P57775 412 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 PPIAP62937 165 aaKnown RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 OCRLQ01968 901 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 EFR3AQ14156 821 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 SPDYE7PQ495Y7 208 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 PRAMEF20Q5VT98 475 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 ZNF551Q7Z340 670 aaPredicted RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 NUP54Q7Z3B4 507 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 SPATA19Q7Z5L4 167 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 PACS2Q86VP3 889 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 SLC44A2Q8IWA5 706 aaPredicted RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 OR2L13Q8N349 312 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 OR7A2PQ8NGA2 310 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 JSRP1Q96MG2 331 aaPredicted RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 ZBTB18Q99592 522 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 BHLHE41Q9C0J9 482 aaPredicted RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 TSPAN10Q9H1Z9 355 aaPredicted RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 IL1RL2Q9HB29 575 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 NEUROD4Q9HD90 331 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 PCDHGB4Q9UN71 923 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 OSGIN2Q9Y236 505 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 DTX4Q9Y2E6 619 aa20.13■□□□□ 0.81
SSPN-204ENST00000535504 GPR55Q9Y2T6 319 aaPredicted RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.13■□□□□ 0.81
SSPN-204ENST00000535504 TO15178 435 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 ASNA1O43681 348 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 CDC40O60508 579 aaKnown RBP eCLIP20.12■□□□□ 0.81
SSPN-204ENST00000535504 SNX4O95219 450 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 ABOP16442 354 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 RFC3P40938 356 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 PRKAG1P54619 331 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 MLC1Q15049 377 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 DPY19L1Q2PZI1 675 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 PGS1Q32NB8 556 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 ZNF385BQ569K4 471 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 BHLHB9Q6PI77 547 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 LYPD8Q6UX82 237 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 TMEM64Q6YI46 380 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 EID3Q8N140 333 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 ZNF597Q96LX8 424 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 DUSP26Q9BV47 211 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 ANKRA2Q9H9E1 313 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 KLRF1Q9NZS2 232 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 SNX8Q9Y5X2 465 aa20.12■□□□□ 0.81
SSPN-204ENST00000535504 ZGRF1Q86YA3 2104 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 PRRC2CQ9Y520 2896 aaKnown RBP20.11■□□□□ 0.81
SSPN-204ENST00000535504 UQCRHLA0A096LP55 91 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 A0A1B0GUH1 482 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 UPK1AO00322 258 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 EMC8O43402 210 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 PIGAP37287 484 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 DNASE1L1P49184 302 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 KCNK10P57789 538 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 DUSP8Q13202 625 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 DECR1Q16698 335 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 OGFOD2Q6N063 350 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 ACAD11Q709F0 780 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 NUP43Q8NFH3 380 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 SPPL2AQ8TCT8 520 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 OR5P2Q8WZ92 322 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 MOAP1Q96BY2 351 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 CHMP6Q96FZ7 201 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 VSTM2LQ96N03 204 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 C7orf26Q96N11 449 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 COL21A1Q96P44 957 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 MS4A4EQ96PG1 132 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 TTTY12Q9BZ98 90 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 EQTNQ9NQ60 294 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 DEPPQ9NTK1 212 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 SLC5A6Q9Y289 635 aa20.11■□□□□ 0.81
SSPN-204ENST00000535504 CHCHD2Q9Y6H1 151 aaPredicted RBP20.11■□□□□ 0.81
SSPN-204ENST00000535504 ANKRD33BA6NCL7 494 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 FAM166BA8MTA8 275 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 KCNH1O95259 989 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 ABCB1P08183 1280 aaPredicted RBP20.1■□□□□ 0.81
SSPN-204ENST00000535504 KRT16P08779 473 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 LAMP1P11279 417 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 FRKP42685 505 aaPredicted RBP20.1■□□□□ 0.81
SSPN-204ENST00000535504 PRIM2P49643 509 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 C21orf58P58505 322 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 UBAP2LQ14157 1087 aaKnown RBP20.1■□□□□ 0.81
SSPN-204ENST00000535504 PRSS53Q2L4Q9 553 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 CYP27C1Q4G0S4 372 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 ANXA8L1Q5VT79 327 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 LARP4Q71RC2 724 aaKnown RBP eCLIP20.1■□□□□ 0.81
SSPN-204ENST00000535504 FAM109AQ8N4B1 249 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 ARFGAP2Q8N6H7 521 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 KRTCAP2Q8N6L1 136 aa20.1■□□□□ 0.81
SSPN-204ENST00000535504 CDRT4Q8N9R6 151 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms