RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 UQCRC2P22695 453 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SSR2P43308 183 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 MAGEB1P43366 347 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 GLYR1Q49A26 553 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 BCL2L15Q5TBC7 163 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SLX4IPQ5VYV7 408 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 FAM92BQ6ZTR7 304 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CYB561A3Q8NBI2 242 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SPRYD4Q8WW59 207 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 DEDD2Q8WXF8 326 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SMPDL3AQ92484 453 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CCDC120Q96HB5 630 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 LMLNQ96KR4 655 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 ZNF717Q9BY31 904 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 ZDHHC5Q9C0B5 715 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SEC14L4Q9UDX3 406 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SRRDQ9UH36 339 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 FBXL4Q9UKA2 621 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 RPL36Q9Y3U8 105 aaKnown RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 TRPM6Q9BX84 2022 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 LOC105369274A0A096LPK9 316 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 FAM170BA6NMN3 283 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 A8MUA0 341 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 POLR1CO15160 346 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 DNAJB6O75190 326 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 GKN3PP0CG01 181 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CLCNKAP51800 687 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 TAS2R41P59536 307 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 CHRNEQ04844 493 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 RAB33AQ14088 237 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 ZC3H14Q6PJT7 736 aaKnown RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 ZNF793Q6ZN11 406 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 OR4N4Q8N0Y3 316 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 TRAM1L1Q8N609 369 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 POF1BQ8WVV4 589 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 APOBEC4Q8WW27 367 aaKnown RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 TFGQ92734 400 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 KCTD7Q96MP8 289 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 ORAI3Q9BRQ5 295 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 DPH7Q9BTV6 452 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 ZSCAN5AQ9BUG6 496 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 TMEM38AQ9H6F2 299 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 MOV10Q9HCE1 1003 aaKnown RBP13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SEMA4GQ9NTN9 838 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 SLC23A1Q9UHI7 598 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 GRIP1Q9Y3R0 1128 aa13.09□□□□□ -0.31
LPCAT3-203ENST00000535479 PSMD9O00233 223 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 KIAA0355O15063 1070 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 SPINT1O43278 529 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 TFPIP10646 304 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 CYP2A6P11509 494 aaPredicted RBP13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 C6P13671 934 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 ALAS2P22557 587 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 TRIM23P36406 574 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 ACVR1BP36896 505 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 ERVFC1P60507 584 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 FUT5Q11128 374 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 NDUFAF5Q5TEU4 345 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 OTPQ5XKR4 325 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 FAM205BPQ63HN1 556 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 KRT73Q86Y46 540 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 KREMEN2Q8NCW0 462 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 OR8J1Q8NGP2 316 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 TMEM255BQ8WV15 326 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 PDXPQ96GD0 296 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 HCAR1Q9BXC0 346 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 AICDAQ9GZX7 198 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 ELAC1Q9H777 363 aaKnown RBP13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 DDX31Q9H8H2 851 aaKnown RBP13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 TRANK1O15050 2925 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 CIB4A0PJX0 185 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 ZNF860A6NHJ4 632 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 RAB36O95755 333 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 IFNA14P01570 189 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 LIMS3P0CW19 117 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 LIMS4P0CW20 117 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 CSF2RAP15509 400 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 CPN2P22792 545 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 WDR5P61964 334 aaKnown RBP13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 SLC3A1Q07837 685 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 C6orf132Q5T0Z8 1188 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 C19orf48Q6RUI8 117 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 ZNF730Q6ZMV8 503 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 RNF165Q6ZSG1 346 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 SLC38A6Q8IZM9 456 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 FLCNQ8NFG4 579 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 NEIL3Q8TAT5 605 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 ARRDC3Q96B67 414 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 MRGPRX3Q96LB0 322 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 BBS4Q96RK4 519 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 SECISBP2Q96T21 854 aaKnown RBP13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 CCDC32Q9BV29 185 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 RHBGQ9H310 441 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 SPHK2Q9NRA0 654 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 ZNF222Q9UK12 451 aa13.08□□□□□ -0.32
LPCAT3-203ENST00000535479 KIF26AQ9ULI4 1882 aaPredicted RBP13.07□□□□□ -0.32
LPCAT3-203ENST00000535479 FAM172BPA6NC97 362 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms