RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 PCDH7O60245 1069 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 ICOSLGO75144 302 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 RAF1P04049 648 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 RPS17P08708 135 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 CT62P0C5K7 136 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 CEACAM8P31997 349 aaPredicted RBP12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 CDH13P55290 713 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 EXOSC7Q15024 291 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 TRADDQ15628 312 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 PRICKLE4Q2TBC4 344 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 FBXL19-AS1Q494R0 122 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 SPDYAQ5MJ70 313 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 BICRALQ6AI39 1079 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 TMEM81Q6P7N7 255 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 CDC20BQ86Y33 519 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 PLCZ1Q86YW0 608 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 FAM9CQ8IZT9 166 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 PLD6Q8N2A8 252 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 MEIOBQ8N635 442 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 CDC26Q8NHZ8 85 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 ISL2Q96A47 359 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 EXOSC8Q96B26 276 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 GPR78Q96P69 363 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 RBM24Q9BX46 236 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 C3orf14Q9HBI5 128 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 PROK2Q9HC23 129 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 FANCFQ9NPI8 374 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 SERHLQ9NQF3 203 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 ZDHHC18Q9NUE0 388 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 ZNF358Q9NW07 568 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 MAT2BQ9NZL9 334 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 PPP4R1LQ9P1A2 415 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 FETUBQ9UGM5 382 aa12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 EXO1Q9UQ84 846 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 INTS1Q8N201 2190 aaKnown RBP12.09□□□□□ -0.47
CLSTN3-205ENST00000535452 MBD3L4A6NDZ8 208 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 MBD3L3A6NE82 208 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 MBD3L5A6NJ08 208 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 A8MT66 165 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 SLITRK5O94991 958 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 OR4F21O95013 312 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 CLPSP04118 112 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 ENO1P06733 434 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 DDX5P17844 614 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 ATP5F1P24539 256 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 PTPN6P29350 595 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 NTSP30990 170 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 CPOXP36551 454 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 DLX5P56178 289 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 ZNF155Q12901 538 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 SNTB1Q13884 538 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 CFAP157Q5JU67 520 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 FAM111BQ6SJ93 734 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 LARP4Q71RC2 724 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 HOMEZQ8IX15 550 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 IFT20Q8IY31 132 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 CCDC116Q8IYX3 515 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 MMGT1Q8N4V1 131 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 MBD3L2Q8NHZ7 208 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 ZNF483Q8TF39 744 aaPredicted RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 TMBIM1Q969X1 311 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 WDYHV1Q96HA8 205 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 NSUN5Q96P11 429 aaKnown RBP12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 ALPK1Q96QP1 1244 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 ADOQ96SZ5 270 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 FUT8Q9BYC5 575 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 UBQLN3Q9H347 655 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 NEUROD4Q9HD90 331 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 EHD3Q9NZN3 535 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 DLGAP4Q9Y2H0 992 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 PLEKHA6Q9Y2H5 1048 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 DNAJC13O75165 2243 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 CCDC168Q8NDH2 2452 aa12.08□□□□□ -0.48
CLSTN3-205ENST00000535452 HMX2A2RU54 273 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 KIF2AO00139 706 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 MANBAO00462 879 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 DIAPH2O60879 1101 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 CPN1P15169 458 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 TSPAN8P19075 237 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 SRD5A2P31213 254 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 KCNJ5P48544 419 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 HCFC1P51610 2035 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 ZNF136P52737 540 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 PKNOX1P55347 436 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 RPS3AP61247 264 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 LCP2Q13094 533 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 FGFBP1Q14512 234 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 DAZAP2Q15038 168 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 SH2D4BQ5SQS7 431 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 LETMD1Q6P1Q0 360 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 LUZP2Q86TE4 346 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 TGIF2LYQ8IUE0 185 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 TRIM42Q8IWZ5 723 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 RELL2Q8NC24 303 aaPredicted RBP12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 UHMK1Q8TAS1 419 aaKnown RBP12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 ZNF675Q8TD23 568 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 WNT2BQ93097 391 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 TM4SF18Q96CE8 201 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 DACH2Q96NX9 599 aa12.07□□□□□ -0.48
CLSTN3-205ENST00000535452 ZNF382Q96SR6 550 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms