RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 MST1P26927 711 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 PIGAP37287 484 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 ZFP36L2P47974 494 aaKnown RBP12.91□□□□□ -0.34
VPS11-205ENST00000534551 DNASE1L1P49184 302 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 MEOX1P50221 254 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 GYS2P54840 703 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 HBA1P69905 142 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 PSG6Q00889 435 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 PLCXD2Q0VAA5 305 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 GAB1Q13480 694 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 RNFT1Q5M7Z0 435 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 PAOXQ6QHF9 649 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 OPN5Q6U736 354 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 DNAJC14Q6Y2X3 702 aaPredicted RBP12.91□□□□□ -0.34
VPS11-205ENST00000534551 RTL4Q6ZR62 310 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 GALNT10Q86SR1 603 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 SLC44A2Q8IWA5 706 aaPredicted RBP12.91□□□□□ -0.34
VPS11-205ENST00000534551 LRRC34Q8IZ02 419 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 ARFGAP2Q8N6H7 521 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 TMBIM1Q969X1 311 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 TMEM125Q96AQ2 219 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 C16orf58Q96GQ5 468 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 LCORQ96JN0 433 aaPredicted RBP12.91□□□□□ -0.34
VPS11-205ENST00000534551 YIPF4Q9BSR8 244 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 SH2D2AQ9NP31 389 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 ATAD3AQ9NVI7 634 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 FLRT3Q9NZU0 649 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 GPR55Q9Y2T6 319 aaPredicted RBP12.91□□□□□ -0.34
VPS11-205ENST00000534551 NPFFR2Q9Y5X5 522 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 COPG1Q9Y678 874 aaKnown RBP12.91□□□□□ -0.34
VPS11-205ENST00000534551 PCNX3Q9H6A9 2034 aa12.91□□□□□ -0.34
VPS11-205ENST00000534551 A0A0G2JND7 137 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 CFLARO15519 480 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 ZNHIT1O43257 154 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 UGT2B11O75310 529 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 ACP2P11117 423 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 MDH1P40925 334 aaKnown RBP12.9□□□□□ -0.34
VPS11-205ENST00000534551 KIR3DL1P43629 444 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 RPS26P62854 115 aaKnown RBP12.9□□□□□ -0.34
VPS11-205ENST00000534551 FOXK1P85037 733 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 MRPL49Q13405 166 aaKnown RBP12.9□□□□□ -0.34
VPS11-205ENST00000534551 RPS6KA2Q15349 733 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 NTRK2Q16620 822 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 PDCD4Q53EL6 469 aaKnown RBP12.9□□□□□ -0.34
VPS11-205ENST00000534551 FAM180AQ6UWF9 173 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 SULF2Q8IWU5 870 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 TAGAPQ8N103 731 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 TMEM178AQ8NBL3 297 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 C17orf47Q8NEP4 570 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 NUP43Q8NFH3 380 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 OR4A15Q8NGL6 344 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 CEP70Q8NHQ1 597 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 OR5P2Q8WZ92 322 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 PIK3R3Q92569 461 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 TP53INP1Q96A56 240 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 TESCQ96BS2 214 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 EFHD2Q96C19 240 aaPredicted RBP12.9□□□□□ -0.34
VPS11-205ENST00000534551 ERP27Q96DN0 273 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 MS4A4EQ96PG1 132 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 INPP5KQ9BT40 448 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 SERHL2Q9H4I8 314 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 PROK2Q9HC23 129 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 TIMMDC1Q9NPL8 285 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 ZCCHC3Q9NUD5 404 aaKnown RBP12.9□□□□□ -0.34
VPS11-205ENST00000534551 CNOT11Q9UKZ1 510 aaKnown RBP12.9□□□□□ -0.34
VPS11-205ENST00000534551 CFL2Q9Y281 166 aa12.9□□□□□ -0.34
VPS11-205ENST00000534551 KLF13Q9Y2Y9 288 aaPredicted RBP12.9□□□□□ -0.34
VPS11-205ENST00000534551 CHCHD2Q9Y6H1 151 aaPredicted RBP12.9□□□□□ -0.34
VPS11-205ENST00000534551 DNAJC13O75165 2243 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 C17orf51A8MQB3 221 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 UBDO15205 165 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 PEX1O43933 1283 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 SCN2BO60939 215 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 SLITRK5O94991 958 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 CPSF4O95639 269 aaKnown RBP12.89□□□□□ -0.35
VPS11-205ENST00000534551 VIMP08670 466 aaKnown RBP12.89□□□□□ -0.35
VPS11-205ENST00000534551 IDO1P14902 403 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 CDKN2CP42773 168 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 PPICP45877 212 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 RFX3P48380 749 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 TDGF1P3P51864 188 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 CLNS1AP54105 237 aaKnown RBP12.89□□□□□ -0.35
VPS11-205ENST00000534551 CASP9P55211 416 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 TP53BP2Q13625 1128 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 LASP1Q14847 261 aaKnown RBP12.89□□□□□ -0.35
VPS11-205ENST00000534551 MLC1Q15049 377 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 INAQ16352 499 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 TIGD2Q4W5G0 525 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 MFSD12Q6NUT3 480 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 RPUSD3Q6P087 351 aaKnown RBP12.89□□□□□ -0.35
VPS11-205ENST00000534551 GPALPP1Q8IXQ4 340 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 SLC34A3Q8N130 599 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 HORMAD2Q8N7B1 307 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 OR8J2Q8NGG1 315 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 JADE3Q92613 823 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 HGDQ93099 445 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 NODALQ96S42 347 aa12.89□□□□□ -0.35
VPS11-205ENST00000534551 PRPF18Q99633 342 aaKnown RBP12.89□□□□□ -0.35
VPS11-205ENST00000534551 LMF2Q9BU23 707 aaKnown RBP12.89□□□□□ -0.35
VPS11-205ENST00000534551 TMEM120AQ9BXJ8 343 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms