RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 UROSP10746 265 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 DDCP20711 480 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 IL12BP29460 328 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 NTSP30990 170 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 MPIP34949 423 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 SOX18P35713 384 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 KRT20P35900 424 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 PPICP45877 212 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 ZFP36L2P47974 494 aaKnown RBP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 EMDP50402 254 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 CDK9P50750 372 aaKnown RBP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 NCBP2P52298 156 aaKnown RBP eCLIP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 CORO7P57737 925 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 DNAJB13P59910 316 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 DCAF7P61962 342 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 EIPR1Q53HC9 387 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 WIPI1Q5MNZ9 446 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 SH2D4BQ5SQS7 431 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 RTL6Q6ICC9 239 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 WDR53Q7Z5U6 358 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 YRDCQ86U90 279 aaKnown RBP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 OR1J4Q8NGS1 313 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 ZNF675Q8TD23 568 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 HGDQ93099 445 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 GFM2Q969S9 779 aaKnown RBP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 CTHRC1Q96CG8 243 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 TMEM41AQ96HV5 264 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 SECISBP2Q96T21 854 aaKnown RBP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 OSBPL11Q9BXB4 747 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 TRIM8Q9BZR9 551 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 FOLH1BQ9HBA9 442 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 ACKR4Q9NPB9 350 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 SERHLQ9NQF3 203 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 QPCTLQ9NXS2 382 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 CAMK2AQ9UQM7 478 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 C15orf41Q9Y2V0 281 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 OR10H1Q9Y4A9 318 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 V9GYY5 206 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 MPDZO75970 2070 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 MED12LQ86YW9 2145 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 A0A0G2JNJ9 132 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 SERTM1A2A2V5 107 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 FRG2CA6NGY1 282 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 ENO4A6NNW6 628 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 H3BQF6 201 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 SLC28A1O00337 649 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 AZIN1O14977 448 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 TRIM13O60858 407 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 ICOSLGO75144 302 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 ERN1O75460 977 aaKnown RBP9.54□□□□□ -0.88
CAPN1-225ENST00000533704 BCAS2O75934 225 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-225ENST00000533704 TOXO94900 526 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 GABRA1P14867 456 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 NAGAP17050 411 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 DRD5P21918 477 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 TCEA1P23193 301 aaKnown RBP9.54□□□□□ -0.88
CAPN1-225ENST00000533704 SSTR2P30874 369 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 ADH7P40394 386 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 WNT3P56703 355 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 SLC18A2Q05940 514 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 PCLAFQ15004 111 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 PRSS53Q2L4Q9 553 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 FNDC7Q5VTL7 733 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 TIGD3Q6B0B8 471 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 FAM71E1Q6IPT2 247 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 NOXRED1Q6NXP6 359 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 SLC30A6Q6NXT4 461 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 GALNT18Q6P9A2 607 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 TMEM107Q6UX40 140 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 TRIM46Q7Z4K8 759 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 SLC44A2Q8IWA5 706 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-225ENST00000533704 ULK2Q8IYT8 1036 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 ZNF295-AS1Q8N0V1 137 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 OR7G2Q8NG99 324 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 EFHD2Q96C19 240 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-225ENST00000533704 APOPT1Q96IL0 206 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 COL21A1Q96P44 957 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 FAM111AQ96PZ2 611 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 ADOQ96SZ5 270 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 SPOCK3Q9BQ16 436 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 GATA5Q9BWX5 397 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-225ENST00000533704 MYNNQ9NPC7 610 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 NPDC1Q9NQX5 325 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-225ENST00000533704 Q9UFV3 132 aa9.54□□□□□ -0.88
CAPN1-225ENST00000533704 GPR55Q9Y2T6 319 aaPredicted RBP9.54□□□□□ -0.88
CAPN1-225ENST00000533704 MYO1GB0I1T2 1018 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 SNPHO15079 494 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 RGS14O43566 566 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 AKAP10O43572 662 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 COQ9O75208 318 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 RSL1D1O76021 490 aaKnown RBP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 CHEK2O96017 543 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 HPNP05981 417 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 HOXD4P09016 255 aaPredicted RBP9.53□□□□□ -0.88
CAPN1-225ENST00000533704 LINC00032P0C843 101 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 CT45A8P0DMV1 189 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 CT45A9P0DMV2 189 aa9.53□□□□□ -0.88
CAPN1-225ENST00000533704 TACR1P25103 407 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms