RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 LYARQ9NX58 379 aaKnown RBP7.01□□□□□ -1.29
NXF1-215ENST00000533440 FBXL2Q9UKC9 423 aa7.01□□□□□ -1.29
NXF1-215ENST00000533440 GUCA1BQ9UMX6 200 aa7.01□□□□□ -1.29
NXF1-215ENST00000533440 LIPT1Q9Y234 373 aa7.01□□□□□ -1.29
NXF1-215ENST00000533440 ZNF175Q9Y473 711 aa7.01□□□□□ -1.29
NXF1-215ENST00000533440 MAGED1Q9Y5V3 778 aaPredicted RBP7.01□□□□□ -1.29
NXF1-215ENST00000533440 MEGF8Q7Z7M0 2845 aa7.01□□□□□ -1.29
NXF1-215ENST00000533440 YLPM1P49750 1951 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 FAM95CA0A1B0GW59 222 aa7□□□□□ -1.29
NXF1-215ENST00000533440 PGRMC2O15173 223 aa7□□□□□ -1.29
NXF1-215ENST00000533440 ACOX3O15254 700 aa7□□□□□ -1.29
NXF1-215ENST00000533440 NDUFS7O75251 213 aa7□□□□□ -1.29
NXF1-215ENST00000533440 EEDO75530 441 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 FAM58BPP0C7Q3 252 aa7□□□□□ -1.29
NXF1-215ENST00000533440 PCNAP12004 261 aa7□□□□□ -1.29
NXF1-215ENST00000533440 IL11P20809 199 aa7□□□□□ -1.29
NXF1-215ENST00000533440 CNTFP26441 200 aa7□□□□□ -1.29
NXF1-215ENST00000533440 DPP4P27487 766 aa7□□□□□ -1.29
NXF1-215ENST00000533440 BSGP35613 385 aa7□□□□□ -1.29
NXF1-215ENST00000533440 RAP1GDS1P52306 607 aa7□□□□□ -1.29
NXF1-215ENST00000533440 EEFSECP57772 596 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 VLDLRP98155 873 aa7□□□□□ -1.29
NXF1-215ENST00000533440 SRSF2Q01130 221 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 PLCXD2Q0VAA5 305 aa7□□□□□ -1.29
NXF1-215ENST00000533440 NNATQ16517 81 aa7□□□□□ -1.29
NXF1-215ENST00000533440 RNASEH2BQ5TBB1 312 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 OR52E8Q6IFG1 317 aa7□□□□□ -1.29
NXF1-215ENST00000533440 TRMT10BQ6PF06 316 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 DNAJC14Q6Y2X3 702 aaPredicted RBP7□□□□□ -1.29
NXF1-215ENST00000533440 ZC3HC1Q86WB0 502 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 WFDC8Q8IUA0 241 aa7□□□□□ -1.29
NXF1-215ENST00000533440 GBP7Q8N8V2 638 aaPredicted RBP7□□□□□ -1.29
NXF1-215ENST00000533440 PDPRQ8NCN5 879 aa7□□□□□ -1.29
NXF1-215ENST00000533440 OR10H5Q8NGA6 315 aa7□□□□□ -1.29
NXF1-215ENST00000533440 HUS1BQ8NHY5 278 aa7□□□□□ -1.29
NXF1-215ENST00000533440 FNDC9Q8TBE3 224 aa7□□□□□ -1.29
NXF1-215ENST00000533440 RAB3IL1Q8TBN0 382 aa7□□□□□ -1.29
NXF1-215ENST00000533440 SMAP2Q8WU79 429 aaPredicted RBP7□□□□□ -1.29
NXF1-215ENST00000533440 RNF138Q8WVD3 245 aa7□□□□□ -1.29
NXF1-215ENST00000533440 FBXW5Q969U6 566 aa7□□□□□ -1.29
NXF1-215ENST00000533440 GTPBP3Q969Y2 492 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 C11orf24Q96F05 449 aaPredicted RBP7□□□□□ -1.29
NXF1-215ENST00000533440 LCORQ96JN0 433 aaPredicted RBP7□□□□□ -1.29
NXF1-215ENST00000533440 TNFRSF13CQ96RJ3 184 aa7□□□□□ -1.29
NXF1-215ENST00000533440 CENPKQ9BS16 269 aa7□□□□□ -1.29
NXF1-215ENST00000533440 ITPAQ9BY32 194 aa7□□□□□ -1.29
NXF1-215ENST00000533440 GRIP2Q9C0E4 1043 aa7□□□□□ -1.29
NXF1-215ENST00000533440 DDX31Q9H8H2 851 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 WDR41Q9HAD4 459 aa7□□□□□ -1.29
NXF1-215ENST00000533440 LRTM1Q9HBL6 345 aa7□□□□□ -1.29
NXF1-215ENST00000533440 BARX1Q9HBU1 254 aaPredicted RBP7□□□□□ -1.29
NXF1-215ENST00000533440 POPDC3Q9HBV1 291 aa7□□□□□ -1.29
NXF1-215ENST00000533440 PPANQ9NQ55 473 aaKnown RBP7□□□□□ -1.29
NXF1-215ENST00000533440 WHRNQ9P202 907 aa7□□□□□ -1.29
NXF1-215ENST00000533440 CFL2Q9Y281 166 aa7□□□□□ -1.29
NXF1-215ENST00000533440 TSC22D4Q9Y3Q8 395 aa7□□□□□ -1.29
NXF1-215ENST00000533440 PSAT1Q9Y617 370 aa7□□□□□ -1.29
NXF1-215ENST00000533440 IGHV4-30-2A0A087WSY4 118 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 OR6C70A6NIJ9 312 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 EFCAB8A8MWE9 144 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 H0YC42 278 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 TO15178 435 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 CCNT2O60583 730 aaKnown RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 PSMB1P20618 241 aaKnown RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 PIK3R1P27986 724 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 PIK3CBP42338 1070 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 SUCLG1P53597 346 aaKnown RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 GAS1P54826 345 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 TPD52P55327 224 aaPredicted RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 DSCR4P56555 118 aaPredicted RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 LOXL1Q08397 574 aaPredicted RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 MGAT2Q10469 447 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 MAP4K2Q12851 820 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 FRG1Q14331 258 aaKnown RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 PON3Q15166 354 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 CYP1B1Q16678 543 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 EXOC3L2Q2M3D2 409 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 PRICKLE4Q2TBC4 344 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 PGGHGQ32M88 737 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 ZNF672Q499Z4 452 aaPredicted RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 NCMAPQ5T1S8 102 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 STEAP4Q687X5 459 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 GRHL2Q6ISB3 625 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 LRRC70Q7Z2Q7 622 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 GPSM1Q86YR5 675 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 UBQLNLQ8IYU4 475 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 OR4K14Q8NGD5 310 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 OR6K3Q8NGY3 331 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 MAGOHBQ96A72 148 aaKnown RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 TMCO6Q96DC7 493 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 SLC35A4Q96G79 324 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 RHNO1Q9BSD3 238 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 MCMBPQ9BTE3 642 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 TRAF4Q9BUZ4 470 aaPredicted RBP6.99□□□□□ -1.29
NXF1-215ENST00000533440 PINK1Q9BXM7 581 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 CD244Q9BZW8 370 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 ACTR6Q9GZN1 396 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 SHARPINQ9H0F6 387 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 EHD3Q9NZN3 535 aa6.99□□□□□ -1.29
NXF1-215ENST00000533440 ZNF639Q9UID6 485 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms