RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 BAIAP2L1Q9UHR4 511 aa14.12□□□□□ -0.15
CPSF1-210ENST00000532935 BOKQ9UMX3 212 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-210ENST00000532935 GPR55Q9Y2T6 319 aaPredicted RBP14.12□□□□□ -0.15
CPSF1-210ENST00000532935 PHF3Q92576 2039 aaKnown RBP14.12□□□□□ -0.15
CPSF1-210ENST00000532935 ATP6AP2A0A1C7CYW4 349 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 ANKRD33BA6NCL7 494 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 TO15178 435 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 PDPK1O15530 556 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 TBX19O60806 448 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 PEX11AO75192 247 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 NME6O75414 186 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-210ENST00000532935 ATP6AP2O75787 350 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 CLDN1O95832 211 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 ABCB1P08183 1280 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-210ENST00000532935 BGNP21810 368 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 GRK2P25098 689 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 MC3RP41968 323 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 ASMTP46597 345 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 RPP38P78345 283 aaKnown RBP14.11□□□□□ -0.15
CPSF1-210ENST00000532935 ATP6AP1LQ52LC2 224 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 BICRALQ6AI39 1079 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 ANKRD26P1Q6NSI1 321 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 ARHGAP11AQ6P4F7 1023 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 PAOXQ6QHF9 649 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 TMEM107Q6UX40 140 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 SLC34A3Q8N130 599 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 ZNF781Q8N8C0 355 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 ZNF764Q96H86 408 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-210ENST00000532935 CCDC120Q96HB5 630 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 VSTM2LQ96N03 204 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 FOLH1BQ9HBA9 442 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 TAS2R9Q9NYW1 312 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 NUP214P35658 2090 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-210ENST00000532935 CENPEQ02224 2701 aa14.11□□□□□ -0.15
CPSF1-210ENST00000532935 A0A087WV62 115 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 LRRC3CA6NJW4 275 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 PLOD2O00469 737 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 PRRG2O14669 202 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 COQ9O75208 318 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 TRIM3O75382 744 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 ERN1O75460 977 aaKnown RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 SNUPNO95149 360 aaKnown RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 IGHG3P01860 377 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 CT45A8P0DMV1 189 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 CT45A9P0DMV2 189 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 ESRRAP11474 423 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 MAPK1P28482 360 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 CASP3P42574 277 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 SLC1A6P48664 564 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 CORO7P57737 925 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 PLCXD2Q0VAA5 305 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 PDE7AQ13946 482 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 ZNF385BQ569K4 471 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 CT45A2Q5DJT8 189 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 C6orf136Q5SQH8 315 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 HHATQ5VTY9 493 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 MTFR2Q6P444 385 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 NPSR1Q6W5P4 371 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 MAMDC2Q7Z304 686 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 NUP54Q7Z3B4 507 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 DOLPP1Q86YN1 238 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 ANKRD42Q8N9B4 389 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 FAM57AQ8TBR7 257 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 CIDECQ96AQ7 238 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 PPCDCQ96CD2 204 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 ELP4Q96EB1 424 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 ZNF597Q96LX8 424 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 JSRP1Q96MG2 331 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 RILPQ96NA2 401 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 PAIP2Q9BPZ3 127 aaKnown RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 ANGPTL4Q9BY76 406 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 C20orf27Q9GZN8 174 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 ZNF703Q9H7S9 590 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 TMBIM4Q9HC24 238 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 SH3BP4Q9P0V3 963 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 C19orf53Q9UNZ5 99 aaPredicted RBP14.1□□□□□ -0.15
CPSF1-210ENST00000532935 MEMO1Q9Y316 297 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 RAP2CQ9Y3L5 183 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 LIPGQ9Y5X9 500 aa14.1□□□□□ -0.15
CPSF1-210ENST00000532935 TMEM120BA0PK00 339 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 SNX4O95219 450 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 TPOP07202 933 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 CELA3AP09093 270 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 IFI6P09912 130 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 RFPL3SP0C7P2 107 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 WDR4P57081 412 aaKnown RBP14.09□□□□□ -0.15
CPSF1-210ENST00000532935 MAGOHP61326 146 aaKnown RBP14.09□□□□□ -0.15
CPSF1-210ENST00000532935 ZNF155Q12901 538 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-210ENST00000532935 HSPB3Q12988 150 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 STX3Q13277 289 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 SLC10A1Q14973 349 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 PDCD2Q16342 344 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-210ENST00000532935 TMEM198Q66K66 360 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 DESI1Q6ICB0 168 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 TRILQ7L0X0 811 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 ZNF551Q7Z340 670 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-210ENST00000532935 CD163Q86VB7 1156 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 OR2L13Q8N349 312 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 LIX1Q8N485 282 aa14.09□□□□□ -0.15
CPSF1-210ENST00000532935 FNDC5Q8NAU1 212 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms