RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SPATA5L1Q9BVQ7 753 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 LRRN3Q9H3W5 708 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 TFB2MQ9H5Q4 396 aaKnown RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 GLOD4Q9HC38 313 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 MIOXQ9UGB7 285 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ELF5Q9UKW6 265 aaPredicted RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 FZD10Q9ULW2 581 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 GNG14A0A1W2PPG7 69 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF670-ZNF695F2Z2N8 137 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ADAM11O75078 769 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 DCNP07585 359 aaKnown RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 HOXD4P09016 255 aaPredicted RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 PPP3CBP16298 524 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 MAGEA3P43357 314 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 MAGEA12P43365 314 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ILF3Q12906 894 aaKnown RBP eCLIP6.45□□□□□ -1.383e-9■■■■■ 34.9
TGFBR3-209ENST00000532540 TAZQ16635 292 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 PTPRNQ16849 979 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 Q5BKY6 102 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 CPZQ66K79 652 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 TMEM88Q6PEY1 159 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF534Q76KX8 674 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 DCUN1D3Q8IWE4 304 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 LILRB2Q8N423 598 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 C9orf62Q8N4C0 152 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ARL6IP6Q8N6S5 226 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 OR4F6Q8NGB9 312 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 OR10K1Q8NGX5 313 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 OR2T11Q8NH01 316 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ACOT12Q8WYK0 555 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 CLP1Q92989 425 aaKnown RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 RHBDF1Q96CC6 855 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 VWCEQ96DN2 955 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 THAP7Q9BT49 309 aaPredicted RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 MS4A7Q9GZW8 240 aaPredicted RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 GSTO2Q9H4Y5 243 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 TMEM185BQ9H7F4 350 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 SPATA6Q9NWH7 488 aaPredicted RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 SLAMF8Q9P0V8 285 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 DLGAP4Q9Y2H0 992 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC6A5Q9Y345 797 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 MYO10Q9HD67 2058 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 LOC285556D6RIA3 1793 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 TCRBV5S2A0A599 114 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 NPEPPSL1A6NEC2 478 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 CLDN11O75508 207 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ABLIM3O94929 683 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 CBX7O95931 251 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 FGF4P08620 206 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ALPIP09923 528 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 GRK5P34947 590 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 PREPP48147 710 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 RAB5CP51148 216 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 RAP2BP61225 183 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 LRRC32Q14392 662 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC22A10Q63ZE4 541 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 CAPN13Q6MZZ7 669 aaPredicted RBP6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 GSG1LQ6UXU4 331 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 GPAT4Q86UL3 456 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 SFT2D1Q8WV19 159 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 SPHK2Q9NRA0 654 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 GALPQ9UBC7 116 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ERVK-19Q9WJR5 959 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 ENTPD4Q9Y227 616 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 GPR45Q9Y5Y3 372 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 SCN5AQ14524 2016 aa6.45□□□□□ -1.38
TGFBR3-209ENST00000532540 IQCMA0A1B0GVH7 501 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 FXYD1O00168 92 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CLIC1O00299 241 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 UBFD1O14562 309 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ST8SIA5O15466 376 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 PRAF2O60831 178 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 MTX2O75431 263 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 IFNW1P05000 195 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 SERPIND1P05546 499 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 EPB42P16452 691 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF30P17039 623 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 GIFP27352 417 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CERS1P27544 350 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 KDELR2P33947 212 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RPS14P62263 151 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ACSM2AQ08AH3 577 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 PDZK1IP1Q13113 114 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RUNX3Q13761 415 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CPSF6Q16630 551 aaKnown RBP eCLIP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 ACSM2BQ68CK6 577 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CCDC71Q8IV32 467 aaPredicted RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 RASGRP3Q8IV61 690 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 NPWQ8N729 165 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 BOLLQ8N9W6 283 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 INO80EQ8NBZ0 244 aaPredicted RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 PXT1Q8NFP0 134 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 OR5T3Q8NGG3 340 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 UBE2FQ969M7 185 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 MYEOVQ96EZ4 313 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 CNTNAP3BQ96NU0 1288 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 NSUN5Q96P11 429 aaKnown RBP6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 TSSK6Q9BXA6 273 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 FOXQ1Q9C009 403 aa6.44□□□□□ -1.38
TGFBR3-209ENST00000532540 BTBD1Q9H0C5 482 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms