RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 FAHP16930 419 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TSPAN8P19075 237 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 DDCP20711 480 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 IMPDH1P20839 514 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 MAOAP21397 527 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 HIST1H1TP22492 207 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ATP5A1P25705 553 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 CERS1P27544 350 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 BSGP35613 385 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 SSR2P43308 183 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TSFMP43897 325 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 LIM2P55344 173 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 RAB38P57729 211 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 CTXN1P60606 82 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 RPS13P62277 151 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 BTG2P78543 158 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 RHAGQ02094 409 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ACTN3Q08043 901 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 Q0VFX4 171 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TBL3Q12788 808 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 KLRB1Q12918 225 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 IFT88Q13099 833 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TRAF3Q13114 568 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 CUL3Q13618 768 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 PCOLCEQ15113 449 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 MST1LQ2TV78 715 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 GGTA1PQ4G0N0 100 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 UNC50Q53HI1 259 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 SFT2D3Q587I9 215 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 SGO1Q5FBB7 561 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF678Q5SXM1 525 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 FRG2Q64ET8 278 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 OR4C11Q6IEV9 310 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ATG14Q6ZNE5 492 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 QSOX2Q6ZRP7 698 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 LANCL3Q6ZV70 420 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 GPRIN3Q6ZVF9 776 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 RPS27LQ71UM5 84 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 CPEB2Q7Z5Q1 589 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ANKRD37Q7Z713 158 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 SRRM1Q8IYB3 904 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 C4orf33Q8N1A6 199 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 PQLC1Q8N2U9 271 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 RNF175Q8N4F7 328 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 MREGQ8N565 214 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 CCNYL1Q8N7R7 359 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ACOT4Q8N9L9 421 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 FAM47BQ8NA70 645 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TMEM52Q8NDY8 209 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 PLPP5Q8NEB5 264 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 OR4F6Q8NGB9 312 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 LILRB1Q8NHL6 650 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 PPP1R14CQ8TAE6 165 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 WDR20Q8TBZ3 569 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 RDH11Q8TC12 318 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 CPT1CQ8TCG5 803 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TRPC4APQ8TEL6 797 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TSLPQ969D9 159 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 UTP4Q969X6 686 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 FAM162AQ96A26 154 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 L3HYPDHQ96EM0 354 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 IMMP1LQ96LU5 166 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TMEM237Q96Q45 408 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 FRG2BQ96QU4 278 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 SERPINI1Q99574 410 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 LPAR4Q99677 370 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 C1orf43Q9BWL3 253 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TEX12Q9BXU0 123 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 OR51B5Q9H339 312 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF552Q9H707 407 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 BRF2Q9HAW0 419 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 LYRM4Q9HD34 91 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 PFDN4Q9NQP4 134 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 RLIMQ9NVW2 624 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 PSD3Q9NYI0 1048 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 NOP53Q9NZM5 478 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 C5AR2Q9P296 337 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TRPS1Q9UHF7 1281 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 LGALS13Q9UHV8 139 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ANAPC2Q9UJX6 822 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 EMCNQ9ULC0 261 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 SNX6Q9UNH7 406 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 MRPS33Q9Y291 106 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 STK38LQ9Y2H1 464 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 CCL27Q9Y4X3 112 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 IGSF10Q6WRI0 2623 aa5.4□□□□□ -1.55
HMGB1P42-201ENST00000532126 A0A087WWL8 130 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 IGKV3D-11A0A0A0MRZ8 115 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 A0A1B0GTL3 188 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 LOC102723971A0A1B0GUV8 181 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ARHGAP10A1A4S6 786 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 CCDC151A5D8V7 595 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 PPP6CO00743 305 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 PLPP1O14494 284 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 CTNSO60931 367 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 ERLIN1O75477 346 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 SLC22A3O75751 556 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 OR4F21O95013 312 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 SCELO95171 688 aa5.39□□□□□ -1.55
HMGB1P42-201ENST00000532126 KRT6AP02538 564 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms