RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 RNF103-CHMP3A0A140T963 221 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 FRG2CA6NGY1 282 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 EIF4E1BA6NMX2 242 aaKnown RBP20.58■□□□□ 0.89
LRRK1-208ENST00000532029 CAPN14A8MX76 684 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 OR6B1O95007 311 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 UQCRC2P22695 453 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 PSPHP78330 225 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 NFATC3Q12968 1075 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 NADK2Q4G0N4 442 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 Q6ZS92 163 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 DND1Q8IYX4 353 aaKnown RBP20.58■□□□□ 0.89
LRRK1-208ENST00000532029 TRIML2Q8N7C3 387 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 CDRT4Q8N9R6 151 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 OR5AK3PQ8NH89 298 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 VPS33AQ96AX1 596 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 SPDL1Q96EA4 605 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 ITCHQ96J02 903 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 C5orf34Q96MH7 638 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 TRIM45Q9H8W5 580 aaPredicted RBP20.58■□□□□ 0.89
LRRK1-208ENST00000532029 VPS4AQ9UN37 437 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 OR10H1Q9Y4A9 318 aa20.58■□□□□ 0.89
LRRK1-208ENST00000532029 FAM208BQ5VWN6 2430 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 RFXANKO14593 260 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 SNX3O60493 162 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 ZNF354AO60765 605 aaPredicted RBP20.57■□□□□ 0.88
LRRK1-208ENST00000532029 CD46P15529 392 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 TMED10P49755 219 aaKnown RBP20.57■□□□□ 0.88
LRRK1-208ENST00000532029 CORO7P57737 925 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 PLCXD2Q0VAA5 305 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 LASP1Q14847 261 aaKnown RBP20.57■□□□□ 0.88
LRRK1-208ENST00000532029 ZNF169Q14929 603 aaPredicted RBP20.57■□□□□ 0.88
LRRK1-208ENST00000532029 SLC6A19Q695T7 634 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 SPINK14Q6IE38 97 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 MFSD12Q6NUT3 480 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 ZCCHC12Q6PEW1 402 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 SLC44A2Q8IWA5 706 aaPredicted RBP20.57■□□□□ 0.88
LRRK1-208ENST00000532029 PRR22Q8IZ63 422 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 GOT1L1Q8NHS2 421 aaPredicted RBP20.57■□□□□ 0.88
LRRK1-208ENST00000532029 SLC9A6Q92581 669 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 JADE3Q92613 823 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 PNPLA2Q96AD5 504 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 TMEM125Q96AQ2 219 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 SIGLEC12Q96PQ1 595 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 INPP5KQ9BT40 448 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 LMF2Q9BU23 707 aaKnown RBP20.57■□□□□ 0.88
LRRK1-208ENST00000532029 EPN3Q9H201 632 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 Q9N2J8 555 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 SAR1AQ9NR31 198 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 ADAM21Q9UKJ8 722 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 FAF1Q9UNN5 650 aaPredicted RBP20.57■□□□□ 0.88
LRRK1-208ENST00000532029 NPFFR2Q9Y5X5 522 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 NBEAQ8NFP9 2946 aa20.57■□□□□ 0.88
LRRK1-208ENST00000532029 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 TO15178 435 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 CCDC22O60826 627 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 ANP32DO95626 131 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 HMGN2P05204 90 aaKnown RBP20.56■□□□□ 0.88
LRRK1-208ENST00000532029 KRT16P08779 473 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 CT45A8P0DMV1 189 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 CT45A9P0DMV2 189 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 PSG6Q00889 435 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 CT45A2Q5DJT8 189 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 C6orf10Q5SRN2 563 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 NPSR1Q6W5P4 371 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 RTL4Q6ZR62 310 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 ZNF621Q6ZSS3 439 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 WDR53Q7Z5U6 358 aaPredicted RBP20.56■□□□□ 0.88
LRRK1-208ENST00000532029 SLC34A3Q8N130 599 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 MDS2Q8NDY4 140 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 SPACA9Q96E40 222 aaPredicted RBP20.56■□□□□ 0.88
LRRK1-208ENST00000532029 GIMAP5Q96F15 307 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 TRIM4Q9C037 500 aa20.56■□□□□ 0.88
LRRK1-208ENST00000532029 SLC25A12O75746 678 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 NEURL1O76050 574 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 ALOX5P09917 674 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 FBXO45P0C2W1 286 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 NAGAP17050 411 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 ABCD3P28288 659 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 GABRA3P34903 492 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 KRT20P35900 424 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 CHI3L1P36222 383 aaPredicted RBP20.55■□□□□ 0.88
LRRK1-208ENST00000532029 UBAP2LQ14157 1087 aaKnown RBP20.55■□□□□ 0.88
LRRK1-208ENST00000532029 ZNF791Q3KP31 576 aaPredicted RBP20.55■□□□□ 0.88
LRRK1-208ENST00000532029 ZNF766Q5HY98 468 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 SLC25A25Q6KCM7 469 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 LYPD8Q6UX82 237 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 DNAJC14Q6Y2X3 702 aaPredicted RBP20.55■□□□□ 0.88
LRRK1-208ENST00000532029 GK5Q6ZS86 529 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 C6orf120Q7Z4R8 191 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 TMEM178AQ8NBL3 297 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 FBXO30Q8TB52 745 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 GPR151Q8TDV0 419 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 OMA1Q96E52 524 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 C16orf58Q96GQ5 468 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 SLC35G5Q96KT7 338 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 SGCZQ96LD1 299 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 SLC35A5Q9BS91 424 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 YIPF4Q9BSR8 244 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 ACTRT3Q9BYD9 372 aa20.55■□□□□ 0.88
LRRK1-208ENST00000532029 TIMMDC1Q9NPL8 285 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms