RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 DEGS2Q6QHC5 323 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 TOM1L2Q6ZVM7 507 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ERN2Q76MJ5 926 aaKnown RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ARMCX2Q7L311 632 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 LRRC70Q7Z2Q7 622 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CAMKMTQ7Z624 323 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 VASH2Q86V25 355 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 LRRC6Q86X45 466 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CCDC50Q8IVM0 306 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 C10orf67Q8IYJ2 551 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ZNF679Q8IYX0 411 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 SYCP3Q8IZU3 236 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 KDM8Q8N371 416 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CSGALNACT2Q8N6G5 542 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ATAD1Q8NBU5 361 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 LEMD2Q8NC56 503 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ICA1LQ8NDH6 482 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ZNF461Q8TAF7 563 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ZNF671Q8TAW3 534 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 TEX47Q8TBZ9 253 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 PAQR8Q8TEZ7 354 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 UBLCP1Q8WVY7 318 aaPredicted RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ATL1Q8WXF7 558 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 STARD8Q92502 1023 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 HDAC11Q96DB2 347 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 PGM2Q96G03 612 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 FER1L6-AS2Q96M78 137 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 LRRC3BQ96PB8 259 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 PANX2Q96RD6 677 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 FERMT1Q9BQL6 677 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 NTMT1Q9BV86 223 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 GPR61Q9BZJ8 451 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 FAM192AQ9GZU8 254 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 SLC26A1Q9H2B4 701 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 TMEM206Q9H813 350 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 SOHLH2Q9NX45 425 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 PAQR5Q9NXK6 330 aaPredicted RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 CLEC5AQ9NY25 188 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 HAO2Q9NYQ3 351 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ANKMY1Q9P2S6 941 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 DBF4Q9UBU7 674 aaPredicted RBP3.01□□□□□ -1.93
PTPRK-220ENST00000531466 HMGXB4Q9UGU5 601 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 ERVK-19Q9WJR5 959 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 SLC9A8Q9Y2E8 581 aa3.01□□□□□ -1.93
PTPRK-220ENST00000531466 NPC1L1Q9UHC9 1359 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 IGHV3-20A0A0C4DH32 117 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 TRBV5-5A0A0J9YX44 114 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 A0A1B0GTQ1 180 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 FAM230AA0A1W2PPH8 454 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 ZSCAN5BA6NJL1 495 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 TMEM210A6NLX4 147 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 GOLGA8JA6NMD2 632 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 GOLGA8TH3BQL2 631 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 SLC33A1O00400 549 aaPredicted RBP3□□□□□ -1.93
PTPRK-220ENST00000531466 CLDN3O15551 220 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 VEGFDO43915 354 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 SMIM24O75264 130 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 CTAG2O75638 210 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 CBR3O75828 277 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 KRT33AO76009 404 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 AKR7A3O95154 331 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 PRAMEF12O95522 483 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 MT-ATP6P00846 226 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 CSTAP01040 98 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 C9P02748 559 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 IGKV3-11P04433 115 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 ATP1B1P05026 303 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 FHP07954 510 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 KRT7P08729 469 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 IGFBP1P08833 259 aaPredicted RBP3□□□□□ -1.93
PTPRK-220ENST00000531466 LINGO3P0C6S8 592 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 GOLGA8HP0CJ92 632 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 CTRB1P17538 263 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 RPA1P27694 616 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 GCKP35557 465 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 SPAM1P38567 509 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 PPP1R2P41236 205 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 ALDH3B1P43353 468 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 MAGEA9P43362 315 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 TUFMP49411 452 aaKnown RBP3□□□□□ -1.93
PTPRK-220ENST00000531466 SERPINB8P50452 374 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 SNU13P55769 128 aaKnown RBP3□□□□□ -1.93
PTPRK-220ENST00000531466 STX17P56962 302 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 PSMC5P62195 406 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 POLR2GP62487 172 aaKnown RBP eCLIP3□□□□□ -1.93
PTPRK-220ENST00000531466 FADDQ13158 208 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 PPIL2Q13356 520 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 XRCC4Q13426 336 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 DGCR6Q14129 220 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 PTPRCAPQ14761 206 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 RPS6KA1Q15418 735 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 MOGQ16653 247 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 PHKG1Q16816 387 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 MCMDC2Q4G0Z9 681 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 NKAIN1Q4KMZ8 207 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 GPAT3Q53EU6 434 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 THEM4Q5T1C6 240 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 CTRB2Q6GPI1 263 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 PPP1R2P3Q6NXS1 205 aa3□□□□□ -1.93
PTPRK-220ENST00000531466 ZCCHC12Q6PEW1 402 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms