RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ZNF525Q8N782 197 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 CCDC89Q8N998 374 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 C7orf57Q8NEG2 295 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 FNDC9Q8TBE3 224 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 WFDC12Q8WWY7 111 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 HGDQ93099 445 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 KCNC2Q96PR1 638 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 PELOQ9BRX2 385 aaKnown RBP7.36□□□□□ -1.23
CD44-232ENST00000531118 ROGDIQ9GZN7 287 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 OR10A4Q9H209 315 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 PRDM7Q9NQW5 492 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 TAS2R10Q9NYW0 307 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 KLRF1Q9NZS2 232 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 DKKL1Q9UK85 242 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 SLC22A14Q9Y267 594 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 B3GALT5Q9Y2C3 310 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 ZNF175Q9Y473 711 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 MAD1L1Q9Y6D9 718 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 KCNE2Q9Y6J6 123 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 ARFGEF3Q5TH69 2177 aa7.36□□□□□ -1.23
CD44-232ENST00000531118 UQCRHLA0A096LP55 91 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 LOC100289279A0A1B0GTE1 492 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 PRAMEF25A6NGN4 478 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 RTCAO00442 366 aaKnown RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 PRKRAO75569 313 aaKnown RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 PROCP04070 461 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 ZSCAN5DPP0CG00 497 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 C1GALT1C1LP0DN25 315 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 KRT15P19012 456 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 USF1P22415 310 aaPredicted RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 ATP5A1P25705 553 aaKnown RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 CNTFP26441 200 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 ABCD3P28288 659 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 SSTR4P31391 388 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 CDH11P55287 796 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 IRX1P78414 480 aaPredicted RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 TNFRSF17Q02223 184 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 TGM3Q08188 693 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 THOC5Q13769 683 aaKnown RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 PPP1R3AQ16821 1122 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 CR1LQ2VPA4 569 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 HLA-DQA1Q5Y7H0 255 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 SLC30A6Q6NXT4 461 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 PAQR3Q6TCH7 311 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 FAM214BQ7L5A3 538 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 CHMP1BQ7LBR1 199 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 UBE3DQ7Z6J8 389 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 ATG4DQ86TL0 474 aaPredicted RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 KRT78Q8N1N4 520 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 C3orf56Q8N813 242 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 ACOT4Q8N9L9 421 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 WDSUB1Q8N9V3 476 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 OR6K3Q8NGY3 331 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 C10orf105Q8TEF2 133 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 UBASH3BQ8TF42 649 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 ZFAND2BQ8WV99 257 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 FAM168AQ92567 244 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 RHBDF1Q96CC6 855 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 MSI2Q96DH6 328 aaKnown RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 ADAD1Q96M93 576 aaKnown RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 F2RL3Q96RI0 385 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 NODALQ96S42 347 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 PINK1Q9BXM7 581 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 CACNG6Q9BXT2 260 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 TRIM2Q9C040 744 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 MOCS1Q9NZB8 636 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 FBXL2Q9UKC9 423 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 IKZF3Q9UKT9 509 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 EXO1Q9UQ84 846 aaKnown RBP7.35□□□□□ -1.23
CD44-232ENST00000531118 NBEAL2Q6ZNJ1 2754 aa7.35□□□□□ -1.23
CD44-232ENST00000531118 ZCWPW2A0A1B0GU75 182 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 ANKDD1BA6NHY2 528 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 EFCAB8A8MWE9 144 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 H0YC42 278 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 SEC14L5O43304 696 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 ICOSLGO75144 302 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 PPM1BO75688 479 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 CBR3O75828 277 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 HAUS5O94927 633 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 VENTXO95231 258 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 ABCB1P08183 1280 aaPredicted RBP7.34□□□□□ -1.23
CD44-232ENST00000531118 CSF3P09919 207 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 FCGR2AP12318 317 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 CREB1P16220 341 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 TPSB2P20231 275 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 PSMB1P20618 241 aaKnown RBP7.34□□□□□ -1.23
CD44-232ENST00000531118 GPX3P22352 226 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 HIST1H1TP22492 207 aaPredicted RBP7.34□□□□□ -1.23
CD44-232ENST00000531118 NOS3P29474 1203 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 SSR2P43308 183 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 CDKN2DP55273 166 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 TPD52P55327 224 aaPredicted RBP7.34□□□□□ -1.23
CD44-232ENST00000531118 B3GALT5-AS1P59052 145 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 PON3Q15166 354 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 TPSAB1Q15661 275 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 NNATQ16517 81 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 RBM20Q5T481 1227 aaKnown RBP7.34□□□□□ -1.23
CD44-232ENST00000531118 ARMC3Q5W041 872 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 C11orf71Q6IPW1 123 aa7.34□□□□□ -1.23
CD44-232ENST00000531118 SEZ6L2Q6UXD5 910 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms