RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ATP1B1P05026 303 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 FAM153BP0C7A2 387 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 CPMP14384 443 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 NAGAP17050 411 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 ENDOUP21128 410 aaKnown RBP9.62□□□□□ -0.87
CPSF1-203ENST00000527916 S1PR1P21453 382 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 OPRM1P35372 400 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 KRT6CP48668 564 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 PKNOX1P55347 436 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 NAA20P61599 178 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 KCNJ2P63252 427 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 CSTF3Q12996 717 aaKnown RBP9.62□□□□□ -0.87
CPSF1-203ENST00000527916 PRICKLE4Q2TBC4 344 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 FAM153CQ494X1 144 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 ACSF3Q4G176 576 aaPredicted RBP9.62□□□□□ -0.87
CPSF1-203ENST00000527916 SGO1Q5FBB7 561 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 TEX35Q5T0J7 233 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 RPS27LQ71UM5 84 aaKnown RBP9.62□□□□□ -0.87
CPSF1-203ENST00000527916 PM20D2Q8IYS1 436 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 LRRC25Q8N386 305 aaPredicted RBP9.62□□□□□ -0.87
CPSF1-203ENST00000527916 GBP7Q8N8V2 638 aaPredicted RBP9.62□□□□□ -0.87
CPSF1-203ENST00000527916 NEIL3Q8TAT5 605 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 MZB1Q8WU39 189 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 ADIPOR1Q96A54 375 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 CCDC126Q96EE4 140 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 FAIM2Q9BWQ8 316 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 OR10A5Q9H207 317 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 EPB41L4BQ9H329 900 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 PPCSQ9HAB8 311 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 ZFP64Q9NPA5 681 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 PSMC3IPQ9P2W1 217 aaPredicted RBP9.62□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF639Q9UID6 485 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 CNOT11Q9UKZ1 510 aaKnown RBP9.62□□□□□ -0.87
CPSF1-203ENST00000527916 CFL2Q9Y281 166 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 NPFFR2Q9Y5X5 522 aa9.62□□□□□ -0.87
CPSF1-203ENST00000527916 C15orf38-AP3S2A0A0A6YYH1 394 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 A0A1W2PS29 197 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 CCDC151A5D8V7 595 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 TRIM64A6NGJ6 449 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 TRIM64BA6NI03 449 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 H3BQF6 201 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 MANBAO00462 879 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 TP53I11O14683 189 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 CDH16O75309 829 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 SNX4O95219 450 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 ENO1P06733 434 aaKnown RBP9.61□□□□□ -0.87
CPSF1-203ENST00000527916 CT62P0C5K7 136 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 RHOXF2BP0C7M4 288 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 TSPAN8P19075 237 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 CSNK2A2P19784 350 aaPredicted RBP9.61□□□□□ -0.87
CPSF1-203ENST00000527916 FPR1P21462 350 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 CTSSP25774 331 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 SSTR4P31391 388 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 DEKP35659 375 aaKnown RBP9.61□□□□□ -0.87
CPSF1-203ENST00000527916 PIGAP37287 484 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 GSTM5P46439 218 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 TMED10P49755 219 aaKnown RBP9.61□□□□□ -0.87
CPSF1-203ENST00000527916 NRG3P56975 720 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 RPP38P78345 283 aaKnown RBP9.61□□□□□ -0.87
CPSF1-203ENST00000527916 C6orf163Q5TEZ5 329 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 HLA-DQA1Q5Y7H0 255 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 POMZP3Q6PJE2 187 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 SH2D5Q6ZV89 423 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 GPRIN3Q6ZVF9 776 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 CDYL2Q8N8U2 506 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 OR10G3Q8NGC4 313 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 METTL6Q8TCB7 284 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 DOK4Q8TEW6 326 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 SREK1Q8WXA9 508 aaKnown RBP9.61□□□□□ -0.87
CPSF1-203ENST00000527916 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.61□□□□□ -0.87
CPSF1-203ENST00000527916 TMEM158Q8WZ71 300 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 CTHRC1Q96CG8 243 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 NTNG2Q96CW9 530 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 TRIM44Q96DX7 344 aaPredicted RBP9.61□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF681Q96N22 645 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 TMEM237Q96Q45 408 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 GAL3ST4Q96RP7 486 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 RHOXF2Q9BQY4 288 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 ANGPTL4Q9BY76 406 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF703Q9H7S9 590 aaPredicted RBP9.61□□□□□ -0.87
CPSF1-203ENST00000527916 SIRT5Q9NXA8 310 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 MCM8Q9UJA3 840 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 DSCAMO60469 2012 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 ROS1P08922 2347 aa9.61□□□□□ -0.87
CPSF1-203ENST00000527916 SH3D21A4FU49 640 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 TRIM3O75382 744 aaPredicted RBP9.6□□□□□ -0.87
CPSF1-203ENST00000527916 ERN1O75460 977 aaKnown RBP9.6□□□□□ -0.87
CPSF1-203ENST00000527916 BCAS2O75934 225 aaPredicted RBP9.6□□□□□ -0.87
CPSF1-203ENST00000527916 ESRRBO95718 433 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 IL18BPO95998 194 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 PYGBP11216 843 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 NT5EP21589 574 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 HMOX2P30519 316 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 ZNF136P52737 540 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 MGAT2Q10469 447 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 LCP2Q13094 533 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 RPS6KA2Q15349 733 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 SPIN4Q56A73 249 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 NSUN5P2Q63ZY6 315 aa9.6□□□□□ -0.87
CPSF1-203ENST00000527916 HMBOX1Q6NT76 420 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms