RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ZNF888P0CJ79 500 aaPredicted RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 SMIM10L1P0DMW3 83 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 ENDOUP21128 410 aaKnown RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 CDH3P22223 829 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 HNRNPA2B1P22626 353 aaKnown RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 SOX6P35712 828 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 GIPRP48546 466 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 SMSP52788 366 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 IFITM3Q01628 133 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 ZNF45Q02386 682 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 ZNF91Q05481 1191 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 HEPHL1Q6MZM0 1159 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 LRRC25Q8N386 305 aaPredicted RBP14.41□□□□□ -0.1
USH1C-207ENST00000527720 PROKR2Q8NFJ6 384 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 FLVCR1-AS1Q8TAF5 88 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 GNPDA2Q8TDQ7 276 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 SMIM10Q96HG1 83 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 CENPOQ9BU64 300 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 SLC28A3Q9HAS3 691 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 CLEC1BQ9P126 229 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 CFL2Q9Y281 166 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 KCNE3Q9Y6H6 103 aa14.41□□□□□ -0.1
USH1C-207ENST00000527720 ARHGEF17Q96PE2 2063 aaPredicted RBP14.4□□□□□ -0.1
USH1C-207ENST00000527720 A6NCN8 305 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 S100A5P33763 92 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 PTGER1P34995 402 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 ACTR1BP42025 376 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 TAS2R41P59536 307 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 ACTR1AP61163 376 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 MRPS21P82921 87 aaKnown RBP14.4□□□□□ -0.1
USH1C-207ENST00000527720 EFNB1P98172 346 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 PRKCDQ05655 676 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 ADAM15Q13444 863 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 TRAM2Q15035 370 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 FBXO42Q6P3S6 717 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 OLIG3Q7RTU3 272 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 C16orf62Q7Z3J2 963 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 ZFPM2Q8WW38 1151 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 BMFQ96LC9 184 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 SLC6A18Q96N87 628 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 OPALINQ96PE5 141 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 MS4A4EQ96PG1 132 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 TSSK6Q9BXA6 273 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 KLHL28Q9NXS3 571 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 TVP23BQ9NYZ1 205 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 UGT2A1Q9Y4X1 527 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 PEX16Q9Y5Y5 336 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 REV3LO60673 3130 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 F5P12259 2224 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.4□□□□□ -0.1
USH1C-207ENST00000527720 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.4□□□□□ -0.1
USH1C-207ENST00000527720 A0A1W2PS29 197 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 IRGMA1A4Y4 181 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 RFXAPO00287 272 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 CYP7B1O75881 506 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 ZNF10P21506 573 aaPredicted RBP14.4□□□□□ -0.1
USH1C-207ENST00000527720 DRD1P21728 446 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 TGM1P22735 817 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 YPEL5P62699 121 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 RELAQ04206 551 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 CHRNEQ04844 493 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 ST3GAL3Q11203 375 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 GINS1Q14691 196 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 SPHARQ15513 63 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 SSX1Q16384 188 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 PERM1Q5SV97 790 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 CDC73Q6P1J9 531 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 PLEKHG7Q6ZR37 379 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 MRGPREQ86SM8 312 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 NANOGP1Q8N7R0 232 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 ADAMTS15Q8TE58 950 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 OR2A14Q96R47 310 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 OR2A5Q96R48 311 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 ARMC7Q9H6L4 198 aa14.4□□□□□ -0.1
USH1C-207ENST00000527720 SNTNA6NMZ2 147 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 TPST2O60704 377 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 CSO75390 466 aaKnown RBP14.39□□□□□ -0.11
USH1C-207ENST00000527720 CPN2P22792 545 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 TLX1P31314 330 aaPredicted RBP14.39□□□□□ -0.11
USH1C-207ENST00000527720 HTR4Q13639 388 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 C1DQ13901 141 aaKnown RBP14.39□□□□□ -0.11
USH1C-207ENST00000527720 ZNF181Q2M3W8 571 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 FAM214AQ32MH5 1076 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 TPRG1LQ5T0D9 272 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 SLC34A3Q8N130 599 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 OR4K14Q8NGD5 310 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 FGF11Q92914 225 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 TSACCQ96A04 125 aaPredicted RBP14.39□□□□□ -0.11
USH1C-207ENST00000527720 MRGPRX1Q96LB2 322 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 C6orf62Q9GZU0 229 aaPredicted RBP14.39□□□□□ -0.11
USH1C-207ENST00000527720 SIAEQ9HAT2 523 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 EQTNQ9NQ60 294 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 TRNAU1APQ9NX07 287 aaKnown RBP14.39□□□□□ -0.11
USH1C-207ENST00000527720 KCMF1Q9P0J7 381 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 DIMT1Q9UNQ2 313 aaKnown RBP14.39□□□□□ -0.11
USH1C-207ENST00000527720 A0A087WUU8 490 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 TLX2O43763 284 aaPredicted RBP14.39□□□□□ -0.11
USH1C-207ENST00000527720 PRKYO43930 277 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 KIAA0513O60268 411 aa14.39□□□□□ -0.11
USH1C-207ENST00000527720 UPK1BO75841 260 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms