RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 SCN2BO60939 215 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 CLPSP04118 112 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 C8orf89P0DMQ9 161 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 NR2F6P10588 404 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 CD46P15529 392 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF24P17028 368 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 LBPP18428 481 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 DDCP20711 480 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 S1PR1P21453 382 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 JAK1P23458 1154 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 PTGS2P35354 604 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 DLX5P56178 289 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 CLDN8P56748 225 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 C21orf58P58505 322 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 ERVK-8P63133 956 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 EEF1A2Q05639 463 aaKnown RBP10.08□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF763Q0D2J5 394 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 TUBA3CQ13748 450 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 KEAP1Q14145 624 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 NSDHLQ15738 373 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 ATP6AP1LQ52LC2 224 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 H3F3CQ6NXT2 135 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 TUBA3EQ6PEY2 450 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 ARSKQ6UWY0 536 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 ACAD11Q709F0 780 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 CPEB2Q7Z5Q1 589 aaKnown RBP10.08□□□□□ -0.8
NEDD8-204ENST00000526430 KIRREL3Q8IZU9 778 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF321PQ8N8H1 164 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 CLHC1Q8NHS4 586 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 DOK4Q8TEW6 326 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 STON2Q8WXE9 905 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 PPWD1Q96BP3 646 aaKnown RBP10.08□□□□□ -0.8
NEDD8-204ENST00000526430 COQ8BQ96D53 544 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 SIGLEC12Q96PQ1 595 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 TUBB6Q9BUF5 446 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 HES7Q9BYE0 225 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 SLC52A3Q9NQ40 469 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 KLHL1Q9NR64 748 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 AIG1Q9NVV5 245 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 ATP6V1HQ9UI12 483 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 HRH3Q9Y5N1 445 aa10.08□□□□□ -0.8
NEDD8-204ENST00000526430 GNG14A0A1W2PPG7 69 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 A6NNC1 897 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 MYO1GB0I1T2 1018 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 HRKO00198 91 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 PSMD12O00232 456 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-204ENST00000526430 CLDN4O14493 209 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 F12P00748 615 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-204ENST00000526430 CT62P0C5K7 136 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 PRPS2P11908 318 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 LSP1P33241 339 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 PTGER1P34995 402 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 BUD31P41223 144 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-204ENST00000526430 FRKP42685 505 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-204ENST00000526430 GSTM5P46439 218 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 WNT3P56703 355 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 SLC13A2Q13183 592 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 OR1C1Q15619 314 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 SFT2D3Q587I9 215 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 ACER2Q5QJU3 275 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 ANKRD26P1Q6NSI1 321 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 CCDC71Q8IV32 467 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-204ENST00000526430 BEST3Q8N1M1 668 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 FNDC5Q8NAU1 212 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 GFM2Q969S9 779 aaKnown RBP10.07□□□□□ -0.8
NEDD8-204ENST00000526430 CTHRC1Q96CG8 243 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF764Q96H86 408 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF354BQ96LW1 612 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 UTP23Q9BRU9 249 aaKnown RBP10.07□□□□□ -0.8
NEDD8-204ENST00000526430 CCDC28BQ9BUN5 200 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 BRINP2Q9C0B6 783 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 ZNF385DQ9H6B1 395 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 BEX4Q9NWD9 120 aaPredicted RBP10.07□□□□□ -0.8
NEDD8-204ENST00000526430 EHD3Q9NZN3 535 aa10.07□□□□□ -0.8
NEDD8-204ENST00000526430 A8MUA0 341 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 CDK2AP1O14519 115 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 POLR3GO15318 223 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-204ENST00000526430 AKAP10O43572 662 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 LRATO95237 230 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 IGKV3-11P04433 115 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 SLC35E2P0CK97 266 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 LAMP1P11279 417 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 CPMP14384 443 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 DRD4P21917 467 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 GPX3P22352 226 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 TLX1P31314 330 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-204ENST00000526430 FEN1P39748 380 aaKnown RBP10.06□□□□□ -0.8
NEDD8-204ENST00000526430 CD96P40200 585 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 KIR2DL3P43628 341 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 STT3AP46977 705 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 MRPL19P49406 292 aaKnown RBP10.06□□□□□ -0.8
NEDD8-204ENST00000526430 XKP51811 444 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 UFM1P61960 85 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 NKX6-1P78426 367 aaPredicted RBP10.06□□□□□ -0.8
NEDD8-204ENST00000526430 SF3A3Q12874 501 aaKnown RBP eCLIP10.06□□□□□ -0.84e-7■■■□□ 16.8
NEDD8-204ENST00000526430 DUSP8Q13202 625 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 PRICKLE4Q2TBC4 344 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 MFSD4BQ5TF39 518 aa10.06□□□□□ -0.8
NEDD8-204ENST00000526430 OR52E8Q6IFG1 317 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms