RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 FAM153BP0C7A2 387 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 EMDP50402 254 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 GAS1P54826 345 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 FAM27E3Q08E93 113 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 GALNT1Q10472 559 aaPredicted RBP12.94□□□□□ -0.34
CPSF1-201ENST00000526271 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 LTB4RQ15722 352 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 FAM153CQ494X1 144 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 TRMT12Q53H54 448 aaKnown RBP12.94□□□□□ -0.34
CPSF1-201ENST00000526271 Q5PR19 223 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 GRTP1Q5TC63 336 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 ZNF474Q6S9Z5 364 aaPredicted RBP12.94□□□□□ -0.34
CPSF1-201ENST00000526271 CYP20A1Q6UW02 462 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 NUDT13Q86X67 352 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 KIF18BQ86Y91 864 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 TRIM42Q8IWZ5 723 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 CTAGE3PQ8IX95 158 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 ADCY4Q8NFM4 1077 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 OR1J4Q8NGS1 313 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 RHEBL1Q8TAI7 183 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 RDH11Q8TC12 318 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 FBF1Q8TES7 1133 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 SMPDL3BQ92485 455 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 OMA1Q96E52 524 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 ZNF681Q96N22 645 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 WFIKKN1Q96NZ8 548 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 SFXN3Q9BWM7 321 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 TXLNGYQ9BZA5 131 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 IPPKQ9H8X2 491 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 NEUROD4Q9HD90 331 aa12.94□□□□□ -0.34
CPSF1-201ENST00000526271 FARSBQ9NSD9 589 aaKnown RBP12.94□□□□□ -0.34
CPSF1-201ENST00000526271 RYDENQ9NUL5 291 aaKnown RBP12.94□□□□□ -0.34
CPSF1-201ENST00000526271 H0YC42 278 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 PLOD2O00469 737 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 HCRTR2O43614 444 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 UGDHO60701 494 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 SEMA3DO95025 777 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 ALDOAP04075 364 aaKnown RBP12.93□□□□□ -0.34
CPSF1-201ENST00000526271 GSTA2P09210 222 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 NT5EP21589 574 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 ADSLP30566 484 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-201ENST00000526271 SPRP35270 261 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-201ENST00000526271 ALDH18A1P54886 795 aaKnown RBP12.93□□□□□ -0.34
CPSF1-201ENST00000526271 TPD52P55327 224 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-201ENST00000526271 SRYQ05066 204 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 MAP4K2Q12851 820 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 TOMM20Q15388 145 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 TECRLQ5HYJ1 363 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 VWA1Q6PCB0 445 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 RAPH1Q70E73 1250 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 CCDC25Q86WR0 208 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 C7orf57Q8NEG2 295 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 OR7G1Q8NGA0 311 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 CDKL2Q92772 493 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 STARD4Q96DR4 205 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 CNRIP1Q96F85 164 aaPredicted RBP12.93□□□□□ -0.34
CPSF1-201ENST00000526271 YIPF4Q9BSR8 244 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 OSBPL11Q9BXB4 747 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 ZNF225Q9UK10 706 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 EXO1Q9UQ84 846 aaKnown RBP12.93□□□□□ -0.34
CPSF1-201ENST00000526271 PLLPQ9Y342 182 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 PCDHA9Q9Y5H5 950 aa12.93□□□□□ -0.34
CPSF1-201ENST00000526271 A0A1W2PNV4 684 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 ZIC3O60481 467 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 GOSR1O95249 250 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 SBK3P0C264 359 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 CT45A8P0DMV1 189 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 CT45A9P0DMV2 189 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 CYP4B1P13584 511 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 ZNF708P17019 499 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 NAGAP17050 411 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 CR1P17927 2039 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 PIK3R1P27986 724 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 FEN1P39748 380 aaKnown RBP12.92□□□□□ -0.34
CPSF1-201ENST00000526271 MRPS35P82673 323 aaKnown RBP12.92□□□□□ -0.34
CPSF1-201ENST00000526271 HMGCS1Q01581 520 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 KRTAP1-1Q07627 177 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 CAPRIN1Q14444 709 aaKnown RBP12.92□□□□□ -0.34
CPSF1-201ENST00000526271 PRSS53Q2L4Q9 553 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 CT45A2Q5DJT8 189 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 SHEQ5VZ18 495 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 SLC48A1Q6P1K1 146 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 NPSR1Q6W5P4 371 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 GSPT2Q8IYD1 628 aaKnown RBP12.92□□□□□ -0.34
CPSF1-201ENST00000526271 METTL4Q8N3J2 472 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 OR4K14Q8NGD5 310 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 WNT2BQ93097 391 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 ISL2Q96A47 359 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 TM4SF18Q96CE8 201 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 RTN4RQ9BZR6 473 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 NOL11Q9H8H0 719 aaKnown RBP12.92□□□□□ -0.34
CPSF1-201ENST00000526271 METTL7AQ9H8H3 244 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 NINJ2Q9NZG7 142 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 ACOT9Q9Y305 439 aa12.92□□□□□ -0.34
CPSF1-201ENST00000526271 PRAMEF25A6NGN4 478 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 CAPN14A8MX76 684 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 TSPAN2O60636 221 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 CGAP01215 116 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 ATP1B1P05026 303 aa12.91□□□□□ -0.34
CPSF1-201ENST00000526271 PORP16435 677 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms