RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 TEX10Q9NXF1 929 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-211ENST00000525970 KLHL8Q9P2G9 620 aaPredicted RBP3.82□□□□□ -1.8
CSDE1-211ENST00000525970 LNPEPQ9UIQ6 1025 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 SMC3Q9UQE7 1217 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 NAALAD2Q9Y3Q0 740 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 OR10H1Q9Y4A9 318 aa3.82□□□□□ -1.8
CSDE1-211ENST00000525970 NSD2O96028 1365 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 AFF2P51816 1311 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 KIF16BQ96L93 1317 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 PPIAL4CA0A0B4J2A2 164 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 TRBV5-4A0A0C4DH59 114 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 PDLIM1O00151 329 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 INPP4BO15327 924 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 DCXO43602 365 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 OPN1LWP04000 364 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 CCDC159P0C7I6 412 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 PATE4P0C8F1 98 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 PPIAL4GP0DN37 164 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 UQCRBP14927 111 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 UQCRC2P22695 453 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 MAP2K2P36507 400 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 ID1P41134 155 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 OPRL1P41146 370 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 TDO2P48775 406 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 DDX39BQ13838 428 aaKnown RBP3.81□□□□□ -1.8
CSDE1-211ENST00000525970 TFDP1Q14186 410 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 GCKRQ14397 625 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 PDK3Q15120 406 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 MLF2Q15773 248 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-211ENST00000525970 CAMK4Q16566 473 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 CFAP221Q4G0U5 840 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 TCHHL1Q5QJ38 904 aaPredicted RBP3.81□□□□□ -1.8
CSDE1-211ENST00000525970 SEL1L3Q68CR1 1132 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 ZNF841Q6ZN19 808 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 TBC1D10CQ8IV04 446 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 CDH26Q8IXH8 852 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 ANKFN1Q8N957 763 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 OR56B2PQ8NGI1 322 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 OR10G7Q8NGN6 311 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 OR1K1Q8NGR3 316 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 PNPT1Q8TCS8 783 aaKnown RBP3.81□□□□□ -1.8
CSDE1-211ENST00000525970 NT5C3BQ969T7 300 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 NTNG2Q96CW9 530 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 PLEKHA3Q9HB20 300 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 APMAPQ9HDC9 416 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 IL1RAPQ9NPH3 570 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 FAM114A2Q9NRY5 505 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 RBM28Q9NW13 759 aaKnown RBP3.81□□□□□ -1.8
CSDE1-211ENST00000525970 NMRK1Q9NWW6 199 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 GHRLQ9UBU3 117 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 PPP1R3CQ9UQK1 317 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 GSTK1Q9Y2Q3 226 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 PYGO1Q9Y3Y4 419 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 FKBP7Q9Y680 259 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 CSNK1G3Q9Y6M4 447 aa3.81□□□□□ -1.8
CSDE1-211ENST00000525970 GSAPA4D1B5 854 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 CYB561D2O14569 222 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 FRAT2O75474 233 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-211ENST00000525970 ZFAND5O76080 213 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 ADCY5O95622 1261 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 CGAP01215 116 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 IL1BP01584 269 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 GSTA1P08263 222 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 FOSL2P15408 326 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 PSMA2P25787 234 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 FCGR2CP31995 323 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 TSFMP43897 325 aaKnown RBP3.8□□□□□ -1.8
CSDE1-211ENST00000525970 GNB1P62873 340 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 RPS27AP62979 156 aaKnown RBP3.8□□□□□ -1.8
CSDE1-211ENST00000525970 CCNA1P78396 465 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 BEX3Q00994 111 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 PJVKQ0ZLH3 352 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 IDI1Q13907 227 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 UNC50Q53HI1 259 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 TPGS2Q68CL5 300 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 ARHGAP11AQ6P4F7 1023 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 FRRS1Q6ZNA5 592 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 Q6ZSR9 355 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 CHMP1BQ7LBR1 199 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 CARM1Q86X55 608 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 ZNRF1Q8ND25 227 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 OR8J1Q8NGP2 316 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 CNRIP1Q96F85 164 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-211ENST00000525970 GPR174Q9BXC1 333 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 DHX33Q9H6R0 707 aaKnown RBP3.8□□□□□ -1.8
CSDE1-211ENST00000525970 KLRF1Q9NZS2 232 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 C6orf203Q9P0P8 240 aaPredicted RBP3.8□□□□□ -1.8
CSDE1-211ENST00000525970 RNF14Q9UBS8 474 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 EMCNQ9ULC0 261 aa3.8□□□□□ -1.8
CSDE1-211ENST00000525970 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.8□□□□□ -1.8
CSDE1-211ENST00000525970 NPIPA5A0A0B4J1W7 369 aa3.79□□□□□ -1.8
CSDE1-211ENST00000525970 IGHV3-38A0A0C4DH36 116 aa3.79□□□□□ -1.8
CSDE1-211ENST00000525970 IQCMA0A1B0GVH7 501 aa3.79□□□□□ -1.8
CSDE1-211ENST00000525970 LRIT2A6NDA9 550 aa3.79□□□□□ -1.8
CSDE1-211ENST00000525970 NPIPA5E9PKD4 350 aa3.79□□□□□ -1.8
CSDE1-211ENST00000525970 NEDD8-MDP1E9PL57 170 aa3.79□□□□□ -1.8
CSDE1-211ENST00000525970 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.79□□□□□ -1.8
CSDE1-211ENST00000525970 BTN3A3O00478 584 aa3.79□□□□□ -1.8
CSDE1-211ENST00000525970 TM9SF1O15321 606 aa3.79□□□□□ -1.8
CSDE1-211ENST00000525970 CFLARO15519 480 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms