RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 SPAG1Q07617 926 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 NFE2L1Q14494 772 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 MAPK11Q15759 364 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 MOGAT2Q3SYC2 334 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 TAF1BQ53T94 588 aaPredicted RBP3.27□□□□□ -1.89
CD44-219ENST00000525685 XKR4Q5GH76 650 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 LRRC38Q5VT99 294 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 SLC27A4Q6P1M0 643 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 DOK6Q6PKX4 331 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 FRRS1Q6ZNA5 592 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 RFPL4BQ6ZWI9 263 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 Q71RC1 249 aaPredicted RBP3.27□□□□□ -1.89
CD44-219ENST00000525685 COX8CQ7Z4L0 72 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ADGRD2Q7Z7M1 963 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 NELFCDQ8IXH7 590 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 SYCP3Q8IZU3 236 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ZNF485Q8NCK3 441 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ATXN7L3BQ96GX2 97 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 CDKN2AIPNLQ96HQ2 116 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 NSMCE3Q96MG7 304 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ACCSQ96QU6 501 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ZNF300Q96RE9 604 aaPredicted RBP3.27□□□□□ -1.89
CD44-219ENST00000525685 CBWD1Q9BRT8 395 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 TMEM175Q9BSA9 504 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 ATG101Q9BSB4 218 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 TCHPQ9BT92 498 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 CCDC94Q9BW85 323 aaPredicted RBP3.27□□□□□ -1.89
CD44-219ENST00000525685 ZBP1Q9H171 429 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 TMEM206Q9H813 350 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 SRD5A3Q9H8P0 318 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 KCNK13Q9HB14 408 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 TMEM181Q9P2C4 612 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 TUBGCP4Q9UGJ1 667 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 EXOC7Q9UPT5 735 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 PRG3Q9Y2Y8 225 aaPredicted RBP3.27□□□□□ -1.89
CD44-219ENST00000525685 HBS1LQ9Y450 684 aaKnown RBP3.27□□□□□ -1.89
CD44-219ENST00000525685 MMP24Q9Y5R2 645 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 MTCH2Q9Y6C9 303 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 STYXL1Q9Y6J8 313 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 PRSS21Q9Y6M0 314 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 RNF215Q9Y6U7 377 aa3.27□□□□□ -1.89
CD44-219ENST00000525685 CITO14578 2027 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 A0A0B4J203 849 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 SMIM28A0A1B0GU29 152 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 TTC26A0AVF1 554 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 CCDC162PA2VCL2 907 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 MTMR11A4FU01 709 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 GOLGA8IPA6NC78 632 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 SDR42E2A6NKP2 422 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 GOLGA8JA6NMD2 632 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 KRTAP9-6A8MVA2 160 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 E9PQ18 207 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 ZNF263O14978 683 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 IDH3BO43837 385 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 CLTAP09496 248 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 EZRP15311 586 aaKnown RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 UGT1A4P22310 534 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 OXTRP30559 389 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 GPR183P32249 361 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 PEX19P40855 299 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 OR1G1P47890 313 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 ACOT2P49753 483 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 OR1D5P58170 312 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 BTG1P62324 171 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 RPP38P78345 283 aaKnown RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 IRX4P78413 519 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 TRA2AQ13595 282 aaKnown RBP eCLIP3.26□□□□□ -1.89
CD44-219ENST00000525685 RCN2Q14257 317 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 ACKR1Q16570 336 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 KYAT1Q16773 422 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 KNOP1Q1ED39 458 aaKnown RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 ZCWPW2Q504Y3 356 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 C2CD6Q53TS8 623 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 TCEAL5Q5H9L2 206 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 ZNF658Q5TYW1 1059 aaPredicted RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 PLPP4Q5VZY2 271 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 PM20D1Q6GTS8 502 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 TCEAL6Q6IPX3 200 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 ARMCX5Q6P1M9 558 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 CD300LGQ6UXG3 332 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 ALKAL1Q6UXT8 129 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 C17orf107Q6ZR85 190 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 C5orf24Q7Z6I8 188 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 CBWD2Q8IUF1 395 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 C12orf56Q8IXR9 622 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 EFCAB13Q8IY85 973 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 GPD1LQ8N335 351 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 ELMOD1Q8N336 334 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 NKAIN3Q8N8D7 197 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 OR7G3Q8NG95 312 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 CASP10Q92851 521 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 CCDC47Q96A33 483 aaKnown RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 RFT1Q96AA3 541 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 C18orf25Q96B23 403 aaPredicted RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 MRPL38Q96DV4 380 aaKnown RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 MOCOSQ96EN8 888 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 CNRIP1Q96F85 164 aaPredicted RBP3.26□□□□□ -1.89
CD44-219ENST00000525685 B3GALT6Q96L58 329 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 PCDHB18PQ96TA0 734 aa3.26□□□□□ -1.89
CD44-219ENST00000525685 VGLL1Q99990 258 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms