RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 LRIF1Q5T3J3 769 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 LINC00696Q6ZRV3 163 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 BEST3Q8N1M1 668 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 ZADH2Q8N4Q0 377 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 DPP10Q8N608 796 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 TMEM156Q8N614 296 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 LSM14AQ8ND56 463 aaKnown RBP17.31■□□□□ 0.36
PTPRK-218ENST00000525459 SIMC1Q8NDZ2 872 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 RP9Q8TA86 221 aaKnown RBP17.31■□□□□ 0.36
PTPRK-218ENST00000525459 HAS2Q92819 552 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 NEURL3Q96EH8 262 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 GIMAP5Q96F15 307 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 RASL10BQ96S79 203 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 NPAS2Q99743 824 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 UTP23Q9BRU9 249 aaKnown RBP17.31■□□□□ 0.36
PTPRK-218ENST00000525459 SLC35A5Q9BS91 424 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 TRIM4Q9C037 500 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 Q9N2J8 555 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 LHX6Q9UPM6 363 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 DTX4Q9Y2E6 619 aa17.31■□□□□ 0.36
PTPRK-218ENST00000525459 DUXAA6NLW8 204 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 WWP2O00308 870 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 KRT75O95678 551 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 HMGN2P05204 90 aaKnown RBP17.3■□□□□ 0.36
PTPRK-218ENST00000525459 NAGAP17050 411 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 CHI3L1P36222 383 aaPredicted RBP17.3■□□□□ 0.36
PTPRK-218ENST00000525459 GAB1Q13480 694 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 TLR1Q15399 786 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 FCRLBQ6BAA4 426 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 SLC2A7Q6PXP3 512 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 ZNF621Q6ZSS3 439 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 ASB15Q8WXK1 588 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 SLC35G5Q96KT7 338 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 STACQ99469 402 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 CCDC106Q9BWC9 280 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 ACTRT3Q9BYD9 372 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 NXF5Q9H1B4 397 aaKnown RBP17.3■□□□□ 0.36
PTPRK-218ENST00000525459 TRIM45Q9H8W5 580 aaPredicted RBP17.3■□□□□ 0.36
PTPRK-218ENST00000525459 EQTNQ9NQ60 294 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 DUSP22Q9NRW4 184 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 ARMCX1Q9P291 453 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 MRTO4Q9UKD2 239 aaKnown RBP17.3■□□□□ 0.36
PTPRK-218ENST00000525459 PCDHGB3Q9Y5G1 929 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 ITPR1Q14643 2758 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 ASPDHA6ND91 283 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 OR5H15A6NDH6 313 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 AGR2O95994 175 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 NPPAP01160 153 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 PPIBP23284 216 aaKnown RBP17.3■□□□□ 0.36
PTPRK-218ENST00000525459 CYB561P49447 251 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 HLCSP50747 726 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 NR0B1P51843 470 aaKnown RBP17.3■□□□□ 0.36
PTPRK-218ENST00000525459 ARG2P78540 354 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 PSG6Q00889 435 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 CYLC2Q14093 348 aaPredicted RBP17.3■□□□□ 0.36
PTPRK-218ENST00000525459 CYP27C1Q4G0S4 372 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 SAXO2Q658L1 398 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 FAM91A1Q658Y4 838 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 CDC73Q6P1J9 531 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 OR5AK3PQ8NH89 298 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 MIPOL1Q8TD10 442 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 CMTM5Q96DZ9 223 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 INPP5KQ9BT40 448 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 RAD21L1Q9H4I0 556 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 GPATCH2Q9NW75 528 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 TP53TG5Q9Y2B4 290 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 CNTRLQ7Z7A1 2325 aa17.3■□□□□ 0.36
PTPRK-218ENST00000525459 A8MVJ9 347 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 ASNA1O43681 348 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 NKX2-2O95096 273 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 ALOX5P09917 674 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 CT45A8P0DMV1 189 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 CT45A9P0DMV2 189 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 PRDX6P30041 224 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 MAP3K8P41279 467 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 CDKN2CP42773 168 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 PSMD4P55036 377 aaKnown RBP17.29■□□□□ 0.36
PTPRK-218ENST00000525459 LASP1Q14847 261 aaKnown RBP17.29■□□□□ 0.36
PTPRK-218ENST00000525459 MMEL1Q495T6 779 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 CT45A2Q5DJT8 189 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 DNAJC14Q6Y2X3 702 aaPredicted RBP17.29■□□□□ 0.36
PTPRK-218ENST00000525459 C6orf120Q7Z4R8 191 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 SLC34A3Q8N130 599 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 AMER2Q8N7J2 671 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 PCYOX1LQ8NBM8 494 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 PAIP1Q9H074 479 aaKnown RBP17.29■□□□□ 0.36
PTPRK-218ENST00000525459 HPF1Q9NWY4 346 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 CORO2BQ9UQ03 480 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 OR10H1Q9Y4A9 318 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 GMEB1Q9Y692 573 aa17.29■□□□□ 0.36
PTPRK-218ENST00000525459 KMT2BQ9UMN6 2715 aaPredicted RBP17.28■□□□□ 0.36
PTPRK-218ENST00000525459 ABCB7O75027 752 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 NADKO95544 446 aaPredicted RBP17.28■□□□□ 0.36
PTPRK-218ENST00000525459 PTPN6P29350 595 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 KRT20P35900 424 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 KHKP50053 298 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 MRPS22P82650 360 aaKnown RBP17.28■□□□□ 0.36
PTPRK-218ENST00000525459 PLCXD2Q0VAA5 305 aa17.28■□□□□ 0.36
PTPRK-218ENST00000525459 EXOSC6Q5RKV6 272 aaKnown RBP17.28■□□□□ 0.36
PTPRK-218ENST00000525459 ASB18Q6ZVZ8 466 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms