RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 CCDC17Q96LX7 622 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 AMDHD1Q96NU7 426 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 TSSK3Q96PN8 268 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 BTBD10Q9BSF8 475 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 NAT9Q9BTE0 207 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 FUCA2Q9BTY2 467 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 TSSK1BQ9BXA7 367 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 C1QTNF7Q9BXJ2 289 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 OR51V1Q9H2C8 321 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 KCNN2Q9H2S1 579 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 DPEP2Q9H4A9 486 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 FAM124BQ9H5Z6 455 aaPredicted RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 ASB8Q9H765 288 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 METTL8Q9H825 291 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 C10orf88Q9H8K7 445 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 Q9H8V8 135 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 AGO3Q9H9G7 860 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 CHST11Q9NPF2 352 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.12□□□□□ -1.75
CD44-213ENST00000525209 ELOVL2Q9NXB9 296 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 CISD1Q9NZ45 108 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 RCC2Q9P258 522 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 SLC17A7Q9P2U7 560 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 PSMC3IPQ9P2W1 217 aaPredicted RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 ASIC3Q9UHC3 531 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 WDR83OSQ9Y284 106 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 YBX2Q9Y2T7 364 aaKnown RBP4.12□□□□□ -1.75
CD44-213ENST00000525209 FRMPD4Q14CM0 1322 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 JCADQ9P266 1359 aa4.12□□□□□ -1.75
CD44-213ENST00000525209 TCOF1Q13428 1488 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 FRG2CA6NGY1 282 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 E7ESA3 106 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 TRAFD1O14545 582 aaPredicted RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 SLC28A2O43868 658 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 SNX3O60493 162 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 NOL4O94818 638 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 NSA2O95478 260 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 RAF1P04049 648 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 SERPINA6P08185 405 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 ELANEP08246 267 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 F7P08709 466 aaPredicted RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 CT45A8P0DMV1 189 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 CT45A9P0DMV2 189 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 CTSAP10619 480 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 HAPLN1P10915 354 aaPredicted RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 IRF2P14316 349 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 CYP11B1P15538 503 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 GIFP27352 417 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 CDH5P33151 784 aaPredicted RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 UGT1A5P35504 534 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 AHRP35869 848 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 APOBEC1P41238 236 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 UQCRFS1P47985 274 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 PCYT1AP49585 367 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 ART1P52961 327 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 MAZP56270 477 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 PLP1P60201 277 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 RAB14P61106 215 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 GUCY1B3Q02153 619 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 SP3Q02447 781 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 NHLH2Q02577 135 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 GABPAQ06546 454 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 PNRC1Q12796 327 aaPredicted RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 MYBPHQ13203 477 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 EXOSC7Q15024 291 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 SFT2D3Q587I9 215 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 CT45A2Q5DJT8 189 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 MIIPQ5JXC2 388 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 LAIR1Q6GTX8 287 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 DOK6Q6PKX4 331 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 ZNF841Q6ZN19 808 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 GOLGA7Q7Z5G4 137 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 CPEB2Q7Z5Q1 589 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 SATL1Q86VE3 508 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 KMT5CQ86Y97 462 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 PTOV1Q86YD1 416 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 MFSD6LQ8IWD5 586 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 DCUN1D3Q8IWE4 304 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 BEST3Q8N1M1 668 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 PCDH20Q8N6Y1 951 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 KBTBD3Q8NAB2 608 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 CHDHQ8NE62 594 aaPredicted RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 FBXO36Q8NEA4 188 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 OR4D6Q8NGJ1 314 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 OR4D5Q8NGN0 318 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 OR13C3Q8NGS6 347 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 OR4L1Q8NH43 312 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 RP9Q8TA86 221 aaKnown RBP4.11□□□□□ -1.75
CD44-213ENST00000525209 CCDC26Q8TAB7 109 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 HCAR2Q8TDS4 363 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 GTF2H4Q92759 462 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 OTULINQ96BN8 352 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 CCDC127Q96BQ5 260 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 SLC25A36Q96CQ1 311 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 C10orf35Q96D05 121 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 PELI1Q96FA3 418 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 MED30Q96HR3 178 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 ZFYVE19Q96K21 471 aa4.11□□□□□ -1.75
CD44-213ENST00000525209 DEFB118Q96PH6 123 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms