RNA–Protein interactions for RNA: ENST00000523055.5

PCM1-218, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-218ENST00000523055 HLA-DQA1Q5Y7H0 255 aa13.84□□□□□ -0.19
PCM1-218ENST00000523055 MARVELD2Q8N4S9 558 aa13.84□□□□□ -0.19
PCM1-218ENST00000523055 SLC15A4Q8N697 577 aa13.84□□□□□ -0.19
PCM1-218ENST00000523055 OR7G1Q8NGA0 311 aa13.84□□□□□ -0.19
PCM1-218ENST00000523055 TWIST2Q8WVJ9 160 aa13.84□□□□□ -0.19
PCM1-218ENST00000523055 GFM2Q969S9 779 aaKnown RBP13.84□□□□□ -0.19
PCM1-218ENST00000523055 FAM173AQ9BQD7 235 aa13.84□□□□□ -0.19
PCM1-218ENST00000523055 MYNNQ9NPC7 610 aa13.84□□□□□ -0.19
PCM1-218ENST00000523055 SLC35C2Q9NQQ7 365 aa13.84□□□□□ -0.19
PCM1-218ENST00000523055 CCM2LQ9NUG4 571 aaPredicted RBP13.84□□□□□ -0.19
PCM1-218ENST00000523055 CNOT11Q9UKZ1 510 aaKnown RBP13.84□□□□□ -0.19
PCM1-218ENST00000523055 WDR91A4D1P6 747 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 PIP5K1BO14986 540 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 LYPLA1O75608 230 aaPredicted RBP13.83□□□□□ -0.2
PCM1-218ENST00000523055 GLSO94925 669 aaPredicted RBP13.83□□□□□ -0.2
PCM1-218ENST00000523055 JUNP05412 331 aaKnown RBP13.83□□□□□ -0.2
PCM1-218ENST00000523055 ABOP16442 354 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 PRPH2P23942 346 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 ABCD3P28288 659 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 MAGEA5P43359 124 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 EMDP50402 254 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 RPL38P63173 70 aaKnown RBP13.83□□□□□ -0.2
PCM1-218ENST00000523055 MPP2Q14168 576 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 CEBPEQ15744 281 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 RFTN2Q52LD8 501 aaPredicted RBP13.83□□□□□ -0.2
PCM1-218ENST00000523055 TNFAIP8L3Q5GJ75 292 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 SLC22A10Q63ZE4 541 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 ANKRD26P1Q6NSI1 321 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 GK5Q6ZS86 529 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 DDIASQ8IXT1 998 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 DMRTC2Q8IXT2 367 aaPredicted RBP13.83□□□□□ -0.2
PCM1-218ENST00000523055 TMEM251Q8N6I4 163 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 OR6Y1Q8NGX8 325 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 CLHC1Q8NHS4 586 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 ZNF675Q8TD23 568 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 TP53INP1Q96A56 240 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 ZNF395Q9H8N7 513 aaPredicted RBP13.83□□□□□ -0.2
PCM1-218ENST00000523055 ZDHHC11Q9H8X9 412 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 LRTM1Q9HBL6 345 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 MIEF1Q9NQG6 463 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 C1orf109Q9NX04 203 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 EHD3Q9NZN3 535 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 SENP1Q9P0U3 644 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 TRAF6Q9Y4K3 522 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 HRH3Q9Y5N1 445 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 NPFFR2Q9Y5X5 522 aa13.83□□□□□ -0.2
PCM1-218ENST00000523055 LRRC3CA6NJW4 275 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 NPIPB8E9PQR5 432 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 SLC28A1O00337 649 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 LSM1O15116 133 aaKnown RBP13.82□□□□□ -0.2
PCM1-218ENST00000523055 RGS14O43566 566 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 RFPL3SP0C7P2 107 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 SDC1P18827 310 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 SERPINB4P48594 390 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 KCNJ2P63252 427 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 RPS6KA2Q15349 733 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 GALNTL6Q49A17 601 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 TAGAPQ8N103 731 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 FBXW8Q8N3Y1 598 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 OR7G2Q8NG99 324 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 FCRL1Q96LA6 429 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 TSSK3Q96PN8 268 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 LIME1Q9H400 295 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 PLSCR2Q9NRY7 297 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 ZDHHC2Q9UIJ5 367 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.82□□□□□ -0.2
PCM1-218ENST00000523055 RTTNQ86VV8 2226 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 KIAA1549Q9HCM3 1950 aa13.82□□□□□ -0.2
PCM1-218ENST00000523055 ATP6AP2A0A1C7CYW4 349 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 MYO1GB0I1T2 1018 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 ACOT7O00154 380 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 CTIFO43310 598 aaKnown RBP13.81□□□□□ -0.2
PCM1-218ENST00000523055 ITM2AO43736 263 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 SKAP2O75563 359 aaPredicted RBP13.81□□□□□ -0.2
PCM1-218ENST00000523055 ATP6AP2O75787 350 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 TOXO94900 526 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 FGF4P08620 206 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 MSX1P28360 303 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 CORO7P57737 925 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 ZNF385BQ569K4 471 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 RNF165Q6ZSG1 346 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 CD163Q86VB7 1156 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 SLC22A16Q86VW1 577 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 TMEM200AQ86VY9 491 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 FAM9CQ8IZT9 166 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 CLYBLQ8N0X4 340 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 CHDHQ8NE62 594 aaPredicted RBP13.81□□□□□ -0.2
PCM1-218ENST00000523055 FAM76AQ8TAV0 307 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 DIO2Q92813 273 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 C3orf30Q96M34 536 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 JSRP1Q96MG2 331 aaPredicted RBP13.81□□□□□ -0.2
PCM1-218ENST00000523055 BBS4Q96RK4 519 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 MDFIQ99750 246 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 UCK2Q9BZX2 261 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 ZNF703Q9H7S9 590 aaPredicted RBP13.81□□□□□ -0.2
PCM1-218ENST00000523055 IL1RL2Q9HB29 575 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 GIMAP4Q9NUV9 329 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 BAIAP2L1Q9UHR4 511 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 COL6A5A8TX70 2615 aa13.81□□□□□ -0.2
PCM1-218ENST00000523055 HRNRQ86YZ3 2850 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms