RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 G6PDP11413 515 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 FRKP42685 505 aaPredicted RBP16.39■□□□□ 0.21
CLK4-211ENST00000522556 PPICP45877 212 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 RPL14P50914 215 aaKnown RBP16.39■□□□□ 0.21
CLK4-211ENST00000522556 PSG6Q00889 435 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 PLCXD2Q0VAA5 305 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 ZNF155Q12901 538 aaPredicted RBP16.39■□□□□ 0.21
CLK4-211ENST00000522556 FNDC7Q5VTL7 733 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 C3P1Q6ZMU1 363 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 GK5Q6ZS86 529 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 SPPL2CQ8IUH8 684 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 DIO2Q92813 273 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 TMBIM1Q969X1 311 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 ELP4Q96EB1 424 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 AKTIPQ9H8T0 292 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 ZDHHC11Q9H8X9 412 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 PRODH2Q9UF12 536 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 C19orf53Q9UNZ5 99 aaPredicted RBP16.39■□□□□ 0.21
CLK4-211ENST00000522556 ZNF835Q9Y2P0 537 aa16.39■□□□□ 0.21
CLK4-211ENST00000522556 WBP11Q9Y2W2 641 aaKnown RBP16.39■□□□□ 0.21
CLK4-211ENST00000522556 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.39■□□□□ 0.21
CLK4-211ENST00000522556 DNAJC13O75165 2243 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 C2orf72A6NCS6 295 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 WIPF3A6NGB9 483 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 C17orf51A8MQB3 221 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 TBX19O60806 448 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 ZG16O60844 167 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 SNNO75324 88 aaPredicted RBP16.38■□□□□ 0.21
CLK4-211ENST00000522556 SASH3O75995 380 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 LAMP1P11279 417 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 DRD5P21918 477 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 PTGDSP41222 190 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 CA7P43166 264 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 DIO3P55073 304 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 NRG3P56975 720 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 KCNJ2P63252 427 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 KRTCAP3Q53RY4 240 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 GHDCQ8N2G8 530 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 OR2L13Q8N349 312 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 FBXO30Q8TB52 745 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 NTNG2Q96CW9 530 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 ZNF764Q96H86 408 aaPredicted RBP16.38■□□□□ 0.21
CLK4-211ENST00000522556 JSRP1Q96MG2 331 aaPredicted RBP16.38■□□□□ 0.21
CLK4-211ENST00000522556 RILPQ96NA2 401 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 DOHHQ9BU89 302 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 ZNF703Q9H7S9 590 aaPredicted RBP16.38■□□□□ 0.21
CLK4-211ENST00000522556 IL1RL2Q9HB29 575 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 GALNT9Q9HCQ5 603 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 PLSCR2Q9NRY7 297 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 SIRT3Q9NTG7 399 aaPredicted RBP16.38■□□□□ 0.21
CLK4-211ENST00000522556 FLRT3Q9NZU0 649 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 ATP6V1HQ9UI12 483 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 CFL2Q9Y281 166 aa16.38■□□□□ 0.21
CLK4-211ENST00000522556 UTP20O75691 2785 aaKnown RBP16.38■□□□□ 0.21
CLK4-211ENST00000522556 A0A087WV62 115 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 PLOD2O00469 737 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 SDHDO14521 159 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 TO15178 435 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 TRIM3O75382 744 aaPredicted RBP16.37■□□□□ 0.21
CLK4-211ENST00000522556 CASP3P42574 277 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 ASMTP46597 345 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 SLC18A1P54219 525 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 Q6ZPB1 254 aaPredicted RBP16.37■□□□□ 0.21
CLK4-211ENST00000522556 MAVSQ7Z434 540 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 SLC44A2Q8IWA5 706 aaPredicted RBP16.37■□□□□ 0.21
CLK4-211ENST00000522556 SLC34A3Q8N130 599 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 EFHD2Q96C19 240 aaPredicted RBP16.37■□□□□ 0.21
CLK4-211ENST00000522556 ERP27Q96DN0 273 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 HSPBAP1Q96EW2 488 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 OTUB1Q96FW1 271 aaPredicted RBP16.37■□□□□ 0.21
CLK4-211ENST00000522556 ATP6V1G3Q96LB4 118 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 EQTNQ9NQ60 294 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 DDX18Q9NVP1 670 aaKnown RBP16.37■□□□□ 0.21
CLK4-211ENST00000522556 NKIRAS1Q9NYS0 192 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 CNIH4Q9P003 139 aa16.37■□□□□ 0.21
CLK4-211ENST00000522556 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.37■□□□□ 0.21
CLK4-211ENST00000522556 USP9YO00507 2555 aaPredicted RBP16.36■□□□□ 0.21
CLK4-211ENST00000522556 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 B4DXG7 233 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 TSPAN2O60636 221 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 CLDN1O95832 211 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 ALDOCP09972 364 aaKnown RBP16.36■□□□□ 0.21
CLK4-211ENST00000522556 KITP10721 976 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 ABOP16442 354 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 ENDOUP21128 410 aaKnown RBP16.36■□□□□ 0.21
CLK4-211ENST00000522556 MAPK1P28482 360 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 HPCAL1P37235 193 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 TMED10P49755 219 aaKnown RBP16.36■□□□□ 0.21
CLK4-211ENST00000522556 OCRLQ01968 901 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 SLC22A16Q86VW1 577 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 RIMKLAQ8IXN7 391 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 DND1Q8IYX4 353 aaKnown RBP16.36■□□□□ 0.21
CLK4-211ENST00000522556 FAM109AQ8N4B1 249 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 RELTQ969Z4 430 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 GIMAP5Q96F15 307 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 CCDC120Q96HB5 630 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 PHF12Q96QT6 1004 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 SH3GL2Q99962 352 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 ANGPTL4Q9BY76 406 aa16.36■□□□□ 0.21
CLK4-211ENST00000522556 SLC6A15Q9H2J7 730 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms