RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 EFHD1Q9BUP0 239 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 C1QTNF7Q9BXJ2 289 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 MIS12Q9H081 205 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 PXMP2Q9NR77 195 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 ECHDC1Q9NTX5 307 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 RNF186Q9NXI6 227 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 STOX2Q9P2F5 926 aaPredicted RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 RNF6Q9Y252 685 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 RBMX2Q9Y388 322 aaKnown RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 SRPRBQ9Y5M8 271 aaKnown RBP3.63□□□□□ -1.83
SKP1-209ENST00000522552 NEURL4Q96JN8 1562 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 CCDC7Q96M83 1385 aa3.63□□□□□ -1.83
SKP1-209ENST00000522552 TRBV11-1A0A0K0K1C0 115 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CENPVL1A0A0U1RR11 272 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 A0A1W2PRB8 838 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 PLSCR5A0PG75 271 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 GRID2IPA4D2P6 1211 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 ZNF840PA6NDX5 716 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 GOLGA6L9A6NEM1 432 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 C15orf62A8K5M9 175 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SERPINE3A8MV23 424 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 H3BMH7 237 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 ZW10O43264 779 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CALCAP01258 141 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 MT-ND2P03891 347 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 GAPDHP04406 335 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 OXTRP30559 389 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 UGT1A5P35504 534 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 MATKP42679 507 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SLC7A2P52569 658 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SLURP1P55000 103 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 PLP1P60201 277 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SKP1P63208 163 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 EWSR1Q01844 656 aaKnown RBP eCLIP3.62□□□□□ -1.83
SKP1-209ENST00000522552 SRYQ05066 204 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 LRRC63Q05C16 580 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 MFGE8Q08431 387 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 CRMP1Q14194 572 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CTTNQ14247 550 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 GNA13Q14344 377 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 OPCMLQ14982 345 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 ETFDHQ16134 617 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 DUSP6Q16828 381 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 DUOXA1Q1HG43 343 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 VMACQ2NL98 169 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 ZNF284Q2VY69 593 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 GPR33Q49SQ1 333 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 EFHC1Q5JVL4 640 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SLX4IPQ5VYV7 408 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SLC22A10Q63ZE4 541 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SLC8B1Q6J4K2 584 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 RAD9BQ6WBX8 426 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 KCNMB4Q86W47 210 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 RNF130Q86XS8 419 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 PALB2Q86YC2 1186 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 LRRC8AQ8IWT6 810 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CDK20Q8IZL9 346 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CLEC4FQ8N1N0 589 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SLC44A3Q8N4M1 653 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 STXBP6Q8NFX7 210 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 OR7G2Q8NG99 324 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 OR5T3Q8NGG3 340 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 OR1F12Q8NHA8 337 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 TNFRSF14Q92956 283 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SLC35C1Q96A29 364 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 DACT3Q96B18 629 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 FAM89AQ96GI7 184 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 LURAP1Q96LR2 239 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 C10orf90Q96M02 699 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 HINT2Q9BX68 163 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 MAP6D1Q9H9H5 199 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SLC38A7Q9NVC3 462 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 MED17Q9NVC6 651 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 EURLQ9NYK6 297 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 FLRT3Q9NZU0 649 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 ZNF319Q9P2F9 582 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 POLDIP2Q9Y2S7 368 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 UMODL1Q5DID0 1318 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 FRG2CA6NGY1 282 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 TRPC5OSA6NMA1 111 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 C2CD4DB7Z1M9 353 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 TRAFD1O14545 582 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 SH2D1BO14796 132 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 SCAMP2O15127 329 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 CALUO43852 315 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 APOHP02749 345 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 ACAA1P09110 424 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 CCNOP22674 350 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 RBMS1P29558 406 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 RPL9P32969 192 aaKnown RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 CDH5P33151 784 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 HPCAL1P37235 193 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 MAGEA5P43359 124 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 ARRB1P49407 418 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 SGSHP51688 502 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 IST1P53990 364 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 PITX1P78337 314 aaPredicted RBP3.62□□□□□ -1.83
SKP1-209ENST00000522552 HSF1Q00613 529 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 NHLH1Q02575 133 aa3.62□□□□□ -1.83
SKP1-209ENST00000522552 CDH17Q12864 832 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms