RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TINAGQ9UJW2 476 aa18.97■□□□□ 0.63
TRIM35-203ENST00000521253 A0A1B0GTH9 108 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 ANKRD33BA6NCL7 494 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 UPK1AO00322 258 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 TO15178 435 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 PDE9AO76083 593 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 CT45A8P0DMV1 189 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 CT45A9P0DMV2 189 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 ABOP16442 354 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 NAGAP17050 411 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 MAGEA5P43359 124 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 RPL14P50914 215 aaKnown RBP18.96■□□□□ 0.63
TRIM35-203ENST00000521253 PER3P56645 1201 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 CORO7P57737 925 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 PLCXD2Q0VAA5 305 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 PTGR1Q14914 329 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 HYAL4Q2M3T9 481 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 CT45A2Q5DJT8 189 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 IL23RQ5VWK5 629 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 DESI1Q6ICB0 168 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 NPSR1Q6W5P4 371 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 ZNF551Q7Z340 670 aaPredicted RBP18.96■□□□□ 0.63
TRIM35-203ENST00000521253 SLC34A3Q8N130 599 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 OR2L13Q8N349 312 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 ELP4Q96EB1 424 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 PPP1R36Q96LQ0 422 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 SECISBP2Q96T21 854 aaKnown RBP18.96■□□□□ 0.63
TRIM35-203ENST00000521253 DOHHQ9BU89 302 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 ZFP64Q9NPA5 681 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 DDX18Q9NVP1 670 aaKnown RBP18.96■□□□□ 0.63
TRIM35-203ENST00000521253 TAS2R9Q9NYW1 312 aa18.96■□□□□ 0.63
TRIM35-203ENST00000521253 BOKQ9UMX3 212 aaPredicted RBP18.96■□□□□ 0.63
TRIM35-203ENST00000521253 C19orf53Q9UNZ5 99 aaPredicted RBP18.96■□□□□ 0.63
TRIM35-203ENST00000521253 LRRC3CA6NJW4 275 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 COQ9O75208 318 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 ERN1O75460 977 aaKnown RBP18.95■□□□□ 0.62
TRIM35-203ENST00000521253 CASP6P55212 293 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 ZNF155Q12901 538 aaPredicted RBP18.95■□□□□ 0.62
TRIM35-203ENST00000521253 HSPB3Q12988 150 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 TBCELQ5QJ74 424 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 FAM109AQ8N4B1 249 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 HGDQ93099 445 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 ARL8AQ96BM9 186 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 MTERF3Q96E29 417 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 NKIRAS1Q9NYS0 192 aa18.95■□□□□ 0.62
TRIM35-203ENST00000521253 DIDO1Q9BTC0 2240 aaKnown RBP18.94■□□□□ 0.62
TRIM35-203ENST00000521253 CCL21O00585 134 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 SCAMP2O15127 329 aaKnown RBP18.94■□□□□ 0.62
TRIM35-203ENST00000521253 ZG16O60844 167 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 UGT2B11O75310 529 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 PSMG1O95456 288 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 CELA3AP09093 270 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 RFPL3SP0C7P2 107 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 PRPS2P11908 318 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 PTGS2P35354 604 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 HPCAL1P37235 193 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 CASP3P42574 277 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 FRKP42685 505 aaPredicted RBP18.94■□□□□ 0.62
TRIM35-203ENST00000521253 RPP38P78345 283 aaKnown RBP18.94■□□□□ 0.62
TRIM35-203ENST00000521253 ARHGAP11AQ6P4F7 1023 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 NUP54Q7Z3B4 507 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 R3HCC1LQ7Z5L2 792 aaKnown RBP18.94■□□□□ 0.62
TRIM35-203ENST00000521253 TMBIM1Q969X1 311 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 ZBED6CLQ96FA7 236 aaPredicted RBP18.94■□□□□ 0.62
TRIM35-203ENST00000521253 JSRP1Q96MG2 331 aaPredicted RBP18.94■□□□□ 0.62
TRIM35-203ENST00000521253 RILPQ96NA2 401 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 ANGPTL4Q9BY76 406 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 ZNF703Q9H7S9 590 aaPredicted RBP18.94■□□□□ 0.62
TRIM35-203ENST00000521253 PNPOQ9NVS9 261 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 ATP6V1HQ9UI12 483 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 LIPGQ9Y5X9 500 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 ICE1Q9Y2F5 2266 aa18.94■□□□□ 0.62
TRIM35-203ENST00000521253 A1L4Q6 167 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 TRIM3O75382 744 aaPredicted RBP18.93■□□□□ 0.62
TRIM35-203ENST00000521253 IFI6P09912 130 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 GPC1P35052 558 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 EMX2Q04743 252 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 AGBL2Q5U5Z8 902 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 PAOXQ6QHF9 649 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 SLC44A2Q8IWA5 706 aaPredicted RBP18.93■□□□□ 0.62
TRIM35-203ENST00000521253 KIRREL3Q8IZU9 778 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 OR7A2PQ8NGA2 310 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 ZFP28Q8NHY6 868 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 ZNF597Q96LX8 424 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 NODALQ96S42 347 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 AKTIPQ9H8T0 292 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 ACSS1Q9NUB1 689 aaPredicted RBP18.93■□□□□ 0.62
TRIM35-203ENST00000521253 EIF3LQ9Y262 564 aaKnown RBP18.93■□□□□ 0.62
TRIM35-203ENST00000521253 EML6Q6ZMW3 1958 aa18.93■□□□□ 0.62
TRIM35-203ENST00000521253 PRRG2O14669 202 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 SNNO75324 88 aaPredicted RBP18.92■□□□□ 0.62
TRIM35-203ENST00000521253 REM1O75628 298 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 SNX4O95219 450 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 IGHG3P01860 377 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 LAMP1P11279 417 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 G6PDP11413 515 aa18.92■□□□□ 0.62
TRIM35-203ENST00000521253 EFNA1P20827 205 aaPredicted RBP18.92■□□□□ 0.62
TRIM35-203ENST00000521253 RPL3P39023 403 aaKnown RBP18.92■□□□□ 0.62
TRIM35-203ENST00000521253 CDK9P50750 372 aaKnown RBP18.92■□□□□ 0.62
TRIM35-203ENST00000521253 MANFP55145 182 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms