RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 A0A1W2PPM1 405 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 A0A1W2PPR1 153 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 TCRBV9S1A1TA0A576 114 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 FAM92AA1XBS5 289 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 MTMR11A4FU01 709 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 FAM47DPA6NHR8 397 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 KCNK1O00180 336 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 TYROBPO43914 113 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SPAG7O75391 227 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 TADA2AO75478 443 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SPAG6O75602 509 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 RNASEH2AO75792 299 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 ZNF189O75820 626 aaPredicted RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PIAS1O75925 651 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 DFFBO76075 338 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 OAS1P00973 400 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 APOEP02649 317 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CXCL10P02778 98 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 GSTA2P09210 222 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CSH1P0DML2 217 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CSH2P0DML3 217 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 MLNP12872 115 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CCL5P13501 91 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CYP2A7P20853 494 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PTPN3P26045 913 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PSMB4P28070 264 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 RBMS1P29558 406 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SERPINB6P35237 376 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PPARGP37231 505 aaPredicted RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 GARSP41250 739 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 GRIA1P42261 906 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PTGER3P43115 390 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 IFNAR2P48551 515 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SLC18A1P54219 525 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PAX9P55771 341 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CDK16Q00536 496 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PPIDQ08752 370 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 AP1B1Q10567 949 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PDK1Q15118 436 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PARP6Q2NL67 630 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 KBTBD12Q3ZCT8 623 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 FAM98BQ52LJ0 330 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SDHAF4Q5VUM1 108 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 STEAP4Q687X5 459 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 KCTD11Q693B1 232 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 FUT10Q6P4F1 479 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 LRRC8BQ6P9F7 803 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 C6orf89Q6UWU4 347 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 C3orf62Q6ZUJ4 267 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 ANKRD33Q7Z3H0 272 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 TMEM173Q86WV6 379 aaPredicted RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CEP57Q86XR8 500 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 TICAM1Q8IUC6 712 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 LRRC34Q8IZ02 419 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 KIRREL3Q8IZU9 778 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 ZNF567Q8N184 647 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 C4orf33Q8N1A6 199 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 NUP93Q8N1F7 819 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 ATAD1Q8NBU5 361 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 GDAP1Q8TB36 358 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 MGARPQ8TDB4 240 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SMAP2Q8WU79 429 aaPredicted RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CKAP2Q8WWK9 683 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CASP10Q92851 521 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 LRRC39Q96DD0 335 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 TBC1D31Q96DN5 1066 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 CFAP36Q96G28 342 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 MPP4Q96JB8 637 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 B3GALT6Q96L58 329 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 C7orf26Q96N11 449 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 DEFB118Q96PH6 123 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 EBNA1BP2Q99848 306 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 TMEM175Q9BSA9 504 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PITPNM3Q9BZ71 974 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 FAM107BQ9H098 131 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 GBA3Q9H227 469 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 S1PR5Q9H228 398 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 PPIL3Q9H2H8 161 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 TRABDQ9H4I3 376 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 XAB2Q9HCS7 855 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 IL37Q9NZH6 218 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SENP1Q9P0U3 644 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SEPT10Q9P0V9 454 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 OR12D3Q9UGF7 316 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 RSPH14Q9UHP6 348 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 GGA2Q9UJY4 613 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 GRID1Q9ULK0 1009 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SCML2Q9UQR0 700 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 RRP15Q9Y3B9 282 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 SCN8AQ9UQD0 1980 aa3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 ZNF106Q9H2Y7 1883 aaKnown RBP3.41□□□□□ -1.86
CTHRC1-204ENST00000520880 BPTFQ12830 3046 aa3.4□□□□□ -1.86
CTHRC1-204ENST00000520880 IQANK1A0A1B0GTG1 560 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 FAM159BA6NKW6 160 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 TCP11X1B4DZS4 312 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 B4E171 279 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 ANKRD65E5RJM6 399 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 E9PAM4 449 aa3.4□□□□□ -1.87
CTHRC1-204ENST00000520880 TRDMT1O14717 391 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms