RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 NKIRAS2Q9NYR9 191 aa12.81□□□□□ -0.36
PABPC1-208ENST00000519004 ACSL6Q9UKU0 697 aa12.81□□□□□ -0.36
PABPC1-208ENST00000519004 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 TRBV4-1A0A0J9YWV2 114 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 WRBO00258 174 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 ARPC5O15511 151 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 IGF2P01344 180 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 IGLV3-25P01717 112 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 FBP1P09467 338 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 CBSLP0DN79 551 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 OR12D1P0DN82 309 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 GKP32189 559 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 CBSP35520 551 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 GPR143P51810 404 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 XKP51811 444 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 SNRPEP62304 92 aaKnown RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 DGCR2P98153 550 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 GAB1Q13480 694 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 EIF4EBP2Q13542 120 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 CPSF6Q16630 551 aaKnown RBP eCLIP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 AVPI1Q5T686 147 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 PLPPR4Q7Z2D5 763 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 SLITRK4Q8IW52 837 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 SLC30A8Q8IWU4 369 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 TEX26Q8N6G2 289 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 IQCF1Q8N6M8 205 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 ZNF565Q8N9K5 539 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 OR4K2Q8NGD2 314 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 RAD51AP1Q96B01 352 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 APOLD1Q96LR9 279 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 ZNF582Q96NG8 517 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 SEBOXQ9HB31 216 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 CRTAC1Q9NQ79 661 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 C14orf105Q9NVL8 296 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 TVP23BQ9NYZ1 205 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 PLEKHM1Q9Y4G2 1056 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 ENPP4Q9Y6X5 453 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 RLFQ13129 1914 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 HHLA1C9JL84 531 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 H3BN98 237 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 HLA-DPB1P04440 258 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 SPI1P17947 270 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 OAZ1P54368 228 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 RAP2BP61225 183 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 TRAM2Q15035 370 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 MINDY4Q4G0A6 757 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 ZNF425Q6IV72 752 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 PHOSPHO1Q8TCT1 267 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 GEMIN6Q8WXD5 167 aaKnown RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 PEX11GQ96HA9 241 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 ADAT1Q9BUB4 502 aaKnown RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 EBPLQ9BY08 206 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 SLC25A32Q9H2D1 315 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 FGF20Q9NP95 211 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 SEMA3GQ9NS98 782 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 ZNF275Q9NSD4 429 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 FAM120CQ9NX05 1096 aaKnown RBP12.8□□□□□ -0.36
PABPC1-208ENST00000519004 CPA4Q9UI42 421 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
PABPC1-208ENST00000519004 OR2W5A6NFC9 320 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 UPK3BL1B0FP48 263 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 DISC1C4P0D8 188 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 UPK3BL2E5RIL1 263 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 B4GALT3O60512 393 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 PRAMEF2O60811 474 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 AQP8O94778 261 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 OR2A4O95047 310 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 NFATC1O95644 943 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 HIST1H2ABP04908 130 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 KLK3P07288 261 aaPredicted RBP12.79□□□□□ -0.36
PABPC1-208ENST00000519004 LIMS3P0CW19 117 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 LIMS4P0CW20 117 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 INSRRP14616 1297 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 PRPS1L1P21108 318 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 STARP49675 285 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 NR0B1P51843 470 aaKnown RBP12.79□□□□□ -0.36
PABPC1-208ENST00000519004 DCDP81605 110 aaKnown RBP12.79□□□□□ -0.36
PABPC1-208ENST00000519004 SRSF11Q05519 484 aaKnown RBP12.79□□□□□ -0.36
PABPC1-208ENST00000519004 LGALS3BPQ08380 585 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 GUCA2BQ16661 112 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 RTP2Q5QGT7 225 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 PRAMEF13Q5VWM6 474 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 HBMQ6B0K9 141 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 HIST3H2AQ7L7L0 130 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 SERPINA12Q8IW75 414 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 FAM71CQ8NEG0 241 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 OR11G2Q8NGC1 345 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 OR10K1Q8NGX5 313 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 OR51Q1Q8NH59 317 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 GNPDA2Q8TDQ7 276 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 SELENOMQ8WWX9 145 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 FGF11Q92914 225 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 HIST1H2ACQ93077 130 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 CMTM7Q96FZ5 175 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 OR2A7Q96R45 310 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 TSNAXQ99598 290 aaKnown RBP12.79□□□□□ -0.36
PABPC1-208ENST00000519004 SEMA3CQ99985 751 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 MTG2Q9H4K7 406 aa12.79□□□□□ -0.36
PABPC1-208ENST00000519004 WDR26Q9H7D7 661 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms