RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 ARL10Q8N8L6 244 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 RELL2Q8NC24 303 aaPredicted RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 NEK11Q8NG66 645 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 OR6T1Q8NGN1 323 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 WDR36Q8NI36 951 aaKnown RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 FNDC8Q8TC99 324 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 VN1R17PQ8TDU5 208 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 NCLNQ969V3 563 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 C1orf21Q9H246 121 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 RNF41Q9H4P4 317 aaPredicted RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 ESM1Q9NQ30 184 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 NDUFA13Q9P0J0 144 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 MBD2Q9UBB5 411 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 PLA2G4CQ9UP65 541 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 PIN4Q9Y237 131 aaKnown RBP2.34□□□□□ -2.03
SKP1-203ENST00000517625 NTNG1Q9Y2I2 539 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 KLHDC2Q9Y2U9 406 aa2.34□□□□□ -2.03
SKP1-203ENST00000517625 RPGRIP1LQ68CZ1 1315 aa2.34□□□□□ -2.04
SKP1-203ENST00000517625 TRABD2BA6NFA1 517 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 ZSCAN5CA6NGD5 496 aaPredicted RBP2.33□□□□□ -2.04
SKP1-203ENST00000517625 C11orf98E9PRG8 122 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 LRRTM2O43300 516 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 GJB5O95377 273 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 CT45A10P0DMU9 189 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 GHRP10912 638 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 CCND2P30279 289 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 TRIM23P36406 574 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 STK19P49842 368 aaPredicted RBP2.33□□□□□ -2.04
SKP1-203ENST00000517625 EMDP50402 254 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 ATXN3P54252 364 aaPredicted RBP2.33□□□□□ -2.04
SKP1-203ENST00000517625 HMGCS2P54868 508 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 ZP4Q12836 540 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 CRMP1Q14194 572 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 MS4A13Q5J8X5 152 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 ATAD3CQ5T2N8 411 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 FAM219BQ5XKK7 198 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 OR6B2Q6IFH4 312 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 CCBE1Q6UXH8 406 aaPredicted RBP2.33□□□□□ -2.04
SKP1-203ENST00000517625 WDR88Q6ZMY6 472 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 P4HA3Q7Z4N8 544 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 NET1Q7Z628 596 aaPredicted RBP2.33□□□□□ -2.04
SKP1-203ENST00000517625 LINC00612Q8N6U2 182 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 CNNM3Q8NE01 707 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 SLC25A36Q96CQ1 311 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 SAMD8Q96LT4 415 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 FAM111AQ96PZ2 611 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 TMEM237Q96Q45 408 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 MCCC1Q96RQ3 725 aaPredicted RBP2.33□□□□□ -2.04
SKP1-203ENST00000517625 APOOQ9BUR5 198 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 HSD3B7Q9H2F3 369 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 ALG9Q9H6U8 611 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 TIGARQ9NQ88 270 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 CNOT2Q9NZN8 540 aaKnown RBP2.33□□□□□ -2.04
SKP1-203ENST00000517625 KLRF1Q9NZS2 232 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 SPASTQ9UBP0 616 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 ODF2LQ9ULJ1 636 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 TP53TG3Q9ULZ0 132 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 FZR1Q9UM11 496 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 EIF3LQ9Y262 564 aaKnown RBP2.33□□□□□ -2.04
SKP1-203ENST00000517625 RNF115Q9Y4L5 304 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 FKBP7Q9Y680 259 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 GRIN2DO15399 1336 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 POGZQ7Z3K3 1410 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 RAD54L2Q9Y4B4 1467 aa2.33□□□□□ -2.04
SKP1-203ENST00000517625 TRAV9-2A0A087WT02 112 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 A0A0J9YVX5 310 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 PRPSAP2O60256 369 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 LCMT2O60294 686 aaKnown RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 RANBP6O60518 1105 aaKnown RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 SRPX2O60687 465 aaPredicted RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 ZNF253O75346 499 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 RHBDL1O75783 438 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 VENTXO95231 258 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 IGSF6O95976 241 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 ETS1P14921 441 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 GAP43P17677 238 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 MAPK3P27361 379 aaPredicted RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 AKT2P31751 481 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 PRDX2P32119 198 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 HAND2P61296 217 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 ZNF33BQ06732 778 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 PEX6Q13608 980 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 ZIC1Q15915 447 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 TIMM50Q3ZCQ8 353 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 METTL11BQ5VVY1 283 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 LIPKQ5VXJ0 399 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 DMKNQ6E0U4 476 aaPredicted RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 PRR5LQ6MZQ0 368 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 VITQ6UXI7 678 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 C2orf66Q6UXQ4 117 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 GCNT7Q6ZNI0 430 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 ADGRD2Q7Z7M1 963 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 CENPSQ8N2Z9 138 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 CERS5Q8N5B7 392 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 MINDY2Q8NBR6 621 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 RHOXF1Q8NHV9 184 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 C11orf24Q96F05 449 aaPredicted RBP2.32□□□□□ -2.04
SKP1-203ENST00000517625 SIGLEC12Q96PQ1 595 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 CARD6Q9BX69 1037 aa2.32□□□□□ -2.04
SKP1-203ENST00000517625 RAB17Q9H0T7 212 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms