RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 OR1L6Q8NGR2 347 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ARNTL2Q8WYA1 636 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 FAM3CQ92520 227 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 CDKL2Q92772 493 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC35C1Q96A29 364 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 NXPE2Q96DL1 559 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ASB9Q96DX5 294 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 RITA1Q96K30 269 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF317Q96PQ6 595 aaPredicted RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC38A2Q96QD8 506 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ERGIC2Q96RQ1 377 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 WDR77Q9BQA1 342 aaPredicted RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 TTYH2Q9BSA4 534 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 TMEM175Q9BSA9 504 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 FUCA2Q9BTY2 467 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 EFHD1Q9BUP0 239 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 PARD6BQ9BYG5 372 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 SPRY4Q9C004 299 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 LRRN3Q9H3W5 708 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 MRPS30Q9NP92 439 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF302Q9NR11 478 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 GDF3Q9NR23 364 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 MED17Q9NVC6 651 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 RNF186Q9NXI6 227 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 TECRQ9NZ01 308 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 EMC3Q9P0I2 261 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF319Q9P2F9 582 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 IKZF2Q9UKS7 526 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 FZR1Q9UM11 496 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 PRPF19Q9UMS4 504 aaKnown RBP3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 KCTD3Q9Y597 815 aa3.58□□□□□ -1.84
RNU4-60P-201ENST00000517239 TRBV11-1A0A0K0K1C0 115 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 CENPVL1A0A0U1RR11 272 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 PLSCR5A0PG75 271 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 KRTAP23-1A1A580 65 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 GRID2IPA4D2P6 1211 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF840PA6NDX5 716 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 GOLGA6L9A6NEM1 432 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 FAM74A7A6NL05 159 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 HHLA1C9JL84 531 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 TULP2O00295 520 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ETV2O00321 342 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 TRAFD1O14545 582 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 KDELR3O43731 214 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 CALUO43852 315 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 N4BP1O75113 896 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 JTBO76095 146 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 NXPH2O95156 264 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC35G4P0C7Q5 338 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 CHRNB1P11230 501 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF24P17028 368 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 HMOX2P30519 316 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 OTX1P32242 354 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 CDH5P33151 784 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RPL3P39023 403 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC1A4P43007 532 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 GYG1P46976 350 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ARRB1P49407 418 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SGSHP51688 502 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 PLP1P60201 277 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SEC61BP60468 96 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RPS18P62269 152 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 MRPS6P82932 125 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 EWSR1Q01844 656 aaKnown RBP eCLIP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 OGDHQ02218 1023 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 PAX5Q02548 391 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SIGLEC14Q08ET2 396 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 CDH17Q12864 832 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ITGB3BPQ13352 177 aaPredicted RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 CTTNQ14247 550 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 HNF4GQ14541 408 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ITIH4Q14624 930 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 MLANAQ16655 118 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF699Q32M78 642 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 LRRC37A5PQ49AS3 106 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 FAM74A3Q4VXF1 159 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ZNF385BQ569K4 471 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SFT2D3Q587I9 215 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 UMODL1Q5DID0 1318 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 EFHC1Q5JVL4 640 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 PIK3CD-AS1Q5SR53 167 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ASPHD1Q5U4P2 390 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ABHD17BQ5VST6 288 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 AGAP7PQ5VUJ5 663 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 C8orf74Q6P047 294 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 LINGO4Q6UY18 593 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RAD9BQ6WBX8 426 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SPATA31D1Q6ZQQ2 1576 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC16A12Q6ZSM3 486 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SLC24A5Q71RS6 500 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 COPS6Q7L5N1 327 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 MYH14Q7Z406 1995 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SNX20Q7Z614 316 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 SATL1Q86VE3 508 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 FJX1Q86VR8 437 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RNF130Q86XS8 419 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 CACUL1Q86Y37 369 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 LDLRAD3Q86YD5 345 aa3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 RBM45Q8IUH3 476 aaKnown RBP3.57□□□□□ -1.84
RNU4-60P-201ENST00000517239 ARHGEF19Q8IW93 802 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms