RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TMPRSS11EQ9UL52 423 aa2.82□□□□□ -1.96
SCARNA13-201ENST00000516672 TMCO1Q9UM00 188 aa2.82□□□□□ -1.96
SCARNA13-201ENST00000516672 HEBP2Q9Y5Z4 205 aa2.82□□□□□ -1.96
SCARNA13-201ENST00000516672 TEX264Q9Y6I9 313 aa2.82□□□□□ -1.96
SCARNA13-201ENST00000516672 USH1CQ9Y6N9 552 aa2.82□□□□□ -1.96
SCARNA13-201ENST00000516672 COLEC10Q9Y6Z7 277 aa2.82□□□□□ -1.96
SCARNA13-201ENST00000516672 MAGEA13PA6NCF6 341 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CAPN14A8MX76 684 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 H0Y3Z8 333 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 IFRD1O00458 451 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CDK2AP1O14519 115 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 GSC2O15499 205 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SGTAO43765 313 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 HNRNPCL1O60812 293 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CDH16O75309 829 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 GPC4O75487 556 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 NDUFS3O75489 264 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 DCTN3O75935 186 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 FKBP9O95302 570 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 S1PR4O95977 384 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 APOA4P06727 396 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CTSBP07858 339 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 LYNP07948 512 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CHRM2P08172 466 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC35G4P0C7Q5 338 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 PABPC4LP0CB38 370 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 DHRS4L1P0CG22 281 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ACP5P13686 325 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ENO3P13929 434 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ALAS2P22557 587 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ACADLP28330 430 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 NMBRP28336 390 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 GSTT1P30711 240 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 AKT1P31749 480 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 STX2P32856 288 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 UGT2B10P36537 528 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 HSD17B2P37059 387 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ELK3P41970 407 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 MAGEA8P43361 318 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 RANBP1P43487 201 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SERPINB4P48594 390 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 MAN2A2P49641 1150 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 VPS41P49754 854 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 PNLIPRP1P54315 467 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 EMP3P54852 163 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 RELAQ04206 551 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC34A1Q06495 639 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TBL3Q12788 808 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 FOXF2Q12947 444 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 DYNC1I2Q13409 638 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 THOC5Q13769 683 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 GBX1Q14549 363 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 PTPRCAPQ14761 206 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 KRT72Q14CN4 511 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TMED2Q15363 201 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 DBN1Q16643 649 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 INSCQ1MX18 579 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TTLL9Q3SXZ7 439 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 BBS9Q3SYG4 887 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 LIN52Q52LA3 116 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF628Q5EBL2 1059 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CDKL4Q5MAI5 379 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TCHHL1Q5QJ38 904 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 FNBP1LQ5T0N5 605 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 C1QTNF12Q5T7M4 302 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TEDDM1Q5T9Z0 273 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 PTRHD1Q6GMV3 140 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TTC23LQ6PF05 361 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TMEM220Q6QAJ8 160 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 UNC5AQ6ZN44 842 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 RNF111Q6ZNA4 994 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 Q6ZS46 218 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CDHR3Q6ZTQ4 885 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 C3orf62Q6ZUJ4 267 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CLNKQ7Z7G1 428 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 LCA5Q86VQ0 697 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CCDC25Q86WR0 208 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TRAPPC5Q8IUR0 188 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 PALM2Q8IXS6 379 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 TBC1D21Q8IYX1 336 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF655Q8N720 491 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 FBXO15Q8NCQ5 510 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 C2CD4AQ8NCU7 369 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 FBXO27Q8NI29 283 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 IL17DQ8TAD2 202 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 GSDMBQ8TAX9 411 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 NAT14Q8WUY8 206 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 DYDC1Q8WWB3 177 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CDKL2Q92772 493 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC22A18Q96BI1 424 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 HSPBAP1Q96EW2 488 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 CERS2Q96G23 380 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 PDLIM5Q96HC4 596 aaKnown RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF778Q96MU6 729 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 BIRC8Q96P09 236 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 NDNQ99608 321 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF184Q99676 751 aaPredicted RBP2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 GPA33Q99795 319 aa2.81□□□□□ -1.96
SCARNA13-201ENST00000516672 ECSITQ9BQ95 431 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms