RNA–Protein interactions for RNA: ENST00000515711.1

LMNA-224, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-224	ENST00000515711	COL21A1	Q96P44	957 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	ZNF300	Q96RE9	604 aa	Predicted RBP	11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	PIP5K1A	Q99755	562 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	NDC1	Q9BTX1	674 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	PINK1	Q9BXM7	581 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	PIGU	Q9H490	435 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	EQTN	Q9NQ60	294 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	POLE3	Q9NRF9	147 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	DUSP22	Q9NRW4	184 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	MAT2B	Q9NZL9	334 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	NDUFAF4	Q9P032	175 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	HCN3	Q9P1Z3	774 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	KIF17	Q9P2E2	1029 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	PDP2	Q9P2J9	529 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	SLC9A8	Q9Y2E8	581 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	AK5	Q9Y6K8	562 aa		11.18	□□□□□ -0.62
LMNA-224	ENST00000515711	LY6G6E	A0A0G2JKS1	128 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	TNFRSF11B	O00300	401 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	SYT5	O00445	386 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	DSCR3	O14972	297 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	HS6ST1	O60243	411 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	DNAJB6	O75190	326 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	MED26	O95402	600 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	ALPP	P05187	535 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	FES	P07332	822 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	CTSB	P07858	339 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	CHRM4	P08173	479 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	UBTFL6	P0CB48	400 aa	Predicted RBP	11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	ZNF883	P0CG24	379 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	CKMT1A	P12532	417 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	RRM2	P31350	389 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	XCR1	P46094	333 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	GCGR	P47871	477 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	SEPHS1	P49903	392 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	SMIM11A	P58511	58 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	SPIB	Q01892	262 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	FUT5	Q11128	374 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	MAP4K2	Q12851	820 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	IL18R1	Q13478	541 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	ARHGAP11B	Q3KRB8	267 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	IQCC	Q4KMZ1	466 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	EXOSC6	Q5RKV6	272 aa	Known RBP	11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	SNAP47	Q5SQN1	464 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	APLF	Q8IW19	511 aa	Predicted RBP	11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	OR4N5	Q8IXE1	308 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	GALNT12	Q8IXK2	581 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	CYGB	Q8WWM9	190 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	CTHRC1	Q96CG8	243 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	DGAT2	Q96PD7	388 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	PSD2	Q9BQI7	771 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	NUDT22	Q9BRQ3	303 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	YIPF4	Q9BSR8	244 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	SPRTN	Q9H040	489 aa	Predicted RBP	11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	LRRN3	Q9H3W5	708 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	ZNF696	Q9H7X3	374 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	EVA1A	Q9H8M9	152 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	IFT52	Q9Y366	437 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	PCDHGA5	Q9Y5G8	931 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711		U3KQA8	63 aa		11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	ARID1B	Q8NFD5	2236 aa	Predicted RBP	11.17	□□□□□ -0.62
LMNA-224	ENST00000515711	ASH1L	Q9NR48	2969 aa	Known RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711		A0A1B0GX78	115 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	CPED1	A4D0V7	1026 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	ARRDC5	A6NEK1	342 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	FAM227A	F5H4B4	570 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	H6PD	O95479	791 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	RPLP0	P05388	317 aa	Known RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	GUSB	P08236	651 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	PABPC4L	P0CB38	370 aa	Known RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	ITGAM	P11215	1152 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	IGFBP5	P24593	272 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	PRKAR1B	P31321	381 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	STT3A	P46977	705 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	ADARB1	P78563	741 aa	Known RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	DAB2	P98082	770 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	ID2	Q02363	134 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	DSG2	Q14126	1118 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	KCNAB1	Q14722	419 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	ZNHIT3	Q15649	155 aa	Predicted RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	EIPR1	Q53HC9	387 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	TMEM154	Q6P9G4	183 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	DHRS4L2	Q6PKH6	230 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	TBPL2	Q6SJ96	375 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	ZNF605	Q86T29	641 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	EID2	Q8N6I1	236 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	SMYD1	Q8NB12	490 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	CHDH	Q8NE62	594 aa	Predicted RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	GPR32P1	Q8NGA4	272 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	OR51Q1	Q8NH59	317 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	OR1L3	Q8NH93	324 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	APOBEC4	Q8WW27	367 aa	Known RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	HOXB13	Q92826	284 aa	Predicted RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	C16orf58	Q96GQ5	468 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	RBM18	Q96H35	190 aa	Known RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	SLC38A1	Q9H2H9	487 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	ADAP2	Q9NPF8	381 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	KLHL28	Q9NXS3	571 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	VNN3	Q9NY84	501 aa		11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	PDP1	Q9P0J1	537 aa	Predicted RBP	11.16	□□□□□ -0.62
LMNA-224	ENST00000515711	TMEM9	Q9P0T7	183 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms