RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 GIFP27352 417 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 ETV5P41161 510 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CENPAP49450 140 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 STARP49675 285 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 ETV1P50549 477 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 SNTB2Q13425 540 aaKnown RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CCSMST1Q4G0I0 132 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 ZNF311Q5JNZ3 666 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CEACAM19Q7Z692 300 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 FAM20CQ8IXL6 584 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 IQCF2Q8IXL9 164 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 NLGN4YQ8NFZ3 816 aaPredicted RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 ADAMTS15Q8TE58 950 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CREB3L4Q8TEY5 395 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 FAM46AQ96IP4 442 aaKnown RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 F2RL3Q96RI0 385 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 DHRS9Q9BPW9 319 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC6A16Q9GZN6 736 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 RABL2AQ9UBK7 228 aaPredicted RBP12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 TAC3Q9UHF0 121 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 POLHQ9Y253 713 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 CCL27Q9Y4X3 112 aa12.88□□□□□ -0.35
SH3TC1-225ENST00000515682 TRBV5-3A0A0A0MS03 114 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 FAM86C2PA6NEL3 165 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 FAM183AA6NL82 134 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 HRGP04196 525 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 H2AFB2P0C5Z0 115 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 GNA13Q14344 377 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 NDUFA9Q16795 377 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 ZDHHC20Q5W0Z9 365 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 GRHL2Q6ISB3 625 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 PODNL1Q6PEZ8 512 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 GDPD4Q6W3E5 623 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 CLDN22Q8N7P3 220 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 L3MBTL4Q8NA19 623 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 GAL3ST1Q99999 423 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC23A1Q9UHI7 598 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 ERVH48-1M5A8F1 160 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 APOC3P02656 99 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 IFNA16P05015 189 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 PRAMEF14Q5SWL7 426 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 PRAMEF13Q5VWM6 474 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 OR52I1Q8NGK6 324 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC5A11Q8WWX8 675 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 IFT27Q9BW83 186 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 NARFLQ9H6Q4 476 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 THSD1Q9NS62 852 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 GRXCR1A8MXD5 290 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 H3BSH0 61 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC31A1O15431 190 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 REM1O75628 298 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 HSD3B1P14060 373 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 HSD3B2P26439 372 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 LMAN2Q12907 356 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 CCDC157Q569K6 752 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 SLITRK4Q8IW52 837 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 LILRA3Q8N6C8 439 aaPredicted RBP12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 OR8K5Q8NH50 307 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 UBTD2Q8WUN7 234 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 SAMD11Q96NU1 681 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 BARHL1Q9BZE3 327 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 MCOLN1Q9GZU1 580 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 PIGUQ9H490 435 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 ATP13A2Q9NQ11 1180 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 HCFC1R1Q9NWW0 138 aa12.87□□□□□ -0.35
SH3TC1-225ENST00000515682 SOCS5O75159 536 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 HNRNPA1P09651 372 aaKnown RBP eCLIP12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 PEPDP12955 493 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 MAT2AP31153 395 aaKnown RBP12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 MAPK9P45984 424 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 PNLIPRP1P54315 467 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 YIF1BQ5BJH7 314 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 HORMAD2Q8N7B1 307 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 SPRYD4Q8WW59 207 aaPredicted RBP12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 KATNB1Q9BVA0 655 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 A0A0G2JMP0 313 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 A0A0X1KG70 313 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 IQCMA0A1B0GVH7 501 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 CIB4A0PJX0 185 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC22A5O76082 557 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 ETHE1O95571 254 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 MPC1LP0DKB6 136 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 NUP62P37198 522 aaPredicted RBP12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 VIPR2P41587 438 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 PLK5Q496M5 336 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 ZNF385BQ569K4 471 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 NANOGP1Q8N7R0 232 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 OR4M2Q8NGB6 313 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 KLK6Q92876 244 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 PRR14Q9BWN1 585 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 TRIM36Q9NQ86 728 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 SPHK2Q9NRA0 654 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 MARCH5Q9NX47 278 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 ZAR1LA6NP61 321 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 PI15O43692 258 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC35G4P0C7Q5 338 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms