RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 NARFLQ9H6Q4 476 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 TREX1Q9NSU2 369 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 SLAMF8Q9P0V8 285 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 FABP7O15540 132 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 C5AR1P21730 350 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF140P52738 457 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-213ENST00000514442 CRISP1P54107 249 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 GPALPP1Q8IXQ4 340 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 OR7G3Q8NG95 312 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 SGCDQ92629 289 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 CSF3RQ99062 836 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 OR8D2Q9GZM6 311 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 NUBP2Q9Y5Y2 271 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 HCFC2Q9Y5Z7 792 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 PRSS21Q9Y6M0 314 aa12.48□□□□□ -0.41
TCOF1-213ENST00000514442 C2orf74A8MZ97 194 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 CHMP24386 653 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 SOX3P41225 446 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 ZXDBP98169 803 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 SLAMF1Q13291 335 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 KLHL24Q6TFL4 600 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 NXPE4Q6UWF7 544 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 C3P1Q6ZMU1 363 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 ACOT12Q8WYK0 555 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 DAPL1A0PJW8 107 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 ITGA10O75578 1167 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 ADORA3P0DMS8 318 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 JUNDP17535 347 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 ACVR2AP27037 513 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 PRDX3P30048 256 aaKnown RBP12.47□□□□□ -0.41
TCOF1-213ENST00000514442 HLA-FP30511 346 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 SOX9P48436 509 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 NRG3P56975 720 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 FAM26DQ5JW98 314 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 PLAG1Q6DJT9 500 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 REEP3Q6NUK4 255 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 KRT77Q7Z794 578 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 VTCN1Q7Z7D3 282 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 ASPGQ86U10 573 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 MCEMP1Q8IX19 187 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 B3GNT7Q8NFL0 401 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 AMBRA1Q9C0C7 1298 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 Q9N2J8 555 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 RBFOX1Q9NWB1 397 aaKnown RBP12.47□□□□□ -0.41
TCOF1-213ENST00000514442 UPB1Q9UBR1 384 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 MED31Q9Y3C7 131 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 MYO18AQ92614 2054 aaKnown RBP12.47□□□□□ -0.41
TCOF1-213ENST00000514442 MUSKO15146 869 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 EN2P19622 333 aaPredicted RBP12.47□□□□□ -0.41
TCOF1-213ENST00000514442 ERVK-25P63136 954 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 GFOD2Q3B7J2 385 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 GPR149Q86SP6 731 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 CLECL1Q8IZS7 167 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 OR52E4Q8NGH9 312 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 OR5AR1Q8NGP9 310 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 TRMT2BQ96GJ1 504 aaKnown RBP12.47□□□□□ -0.41
TCOF1-213ENST00000514442 GAL3ST1Q99999 423 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 VAPAQ9P0L0 249 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 DNMT3BQ9UBC3 853 aaKnown RBP12.47□□□□□ -0.41
TCOF1-213ENST00000514442 CCL26Q9Y258 94 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 DNMT3AQ9Y6K1 912 aaPredicted RBP12.47□□□□□ -0.41
TCOF1-213ENST00000514442 SDK1Q7Z5N4 2213 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 PPP6CO00743 305 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 SLC35A2P78381 396 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 NNATQ16517 81 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 TGM7Q96PF1 710 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 GPER1Q99527 375 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 EPYCQ99645 322 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 CACNG6Q9BXT2 260 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 WDR45Q9Y484 360 aa12.47□□□□□ -0.41
TCOF1-213ENST00000514442 HHLA1C9JL84 531 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 SGCEO43556 437 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 SSX5O60225 188 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 SLC43A1O75387 559 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 AGR2O95994 175 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 ARSBP15848 533 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 MLLT1Q03111 559 aaPredicted RBP12.46□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF33BQ06732 778 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 ELOCQ15369 112 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 TCEAL5Q5H9L2 206 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 GTF2IRD2BQ6EKJ0 949 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 BTN2A1Q7KYR7 527 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 PARS2Q7L3T8 475 aaKnown RBP12.46□□□□□ -0.41
TCOF1-213ENST00000514442 SLC29A4Q7RTT9 530 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 GTF2IRD2Q86UP8 949 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 SLC5A8Q8N695 610 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 SETD7Q8WTS6 366 aaKnown RBP12.46□□□□□ -0.41
TCOF1-213ENST00000514442 PCNPQ8WW12 178 aaKnown RBP12.46□□□□□ -0.41
TCOF1-213ENST00000514442 ZNF566Q969W8 418 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 APIPQ96GX9 242 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 NEDD4LQ96PU5 975 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 OR4K3Q96R72 315 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 APOBEC3BQ9UH17 382 aaKnown RBP12.46□□□□□ -0.41
TCOF1-213ENST00000514442 PSORS1C1Q9UIG5 152 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 MGAT4BQ9UQ53 548 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 PRSS44E7EML9 344 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 INHBBP09529 407 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 RAB3AP20336 220 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 UQCRC2P22695 453 aa12.46□□□□□ -0.41
TCOF1-213ENST00000514442 CXCR1P25024 350 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms