RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	WLS	Q5T9L3	541 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TTC23	Q5W5X9	447 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	LCLAT1	Q6UWP7	414 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FRRS1	Q6ZNA5	592 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DPY19L4	Q7Z388	723 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TRMT10A	Q8TBZ6	339 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SPRYD4	Q8WW59	207 aa	Predicted RBP	4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	LHX4	Q969G2	390 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	UPRT	Q96BW1	309 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ELMO2	Q96JJ3	720 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TNFRSF13C	Q96RJ3	184 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	GCOM2	Q9BZD3	368 aa	Predicted RBP	4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FANCF	Q9NPI8	374 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DUS2	Q9NX74	493 aa	Known RBP	4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CLEC4A	Q9UMR7	237 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	LRP12	Q9Y561	859 aa		4.24	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	HHLA1	C9JL84	531 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006		K7ERI5	159 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FBP2	O00757	339 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CTAGE5	O15320	804 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR1F1	O43749	312 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	RANBP6	O60518	1105 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SNN	O75324	88 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NEBL	O76041	1014 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TOX	O94900	526 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	IGSF6	O95976	241 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OAS1	P00973	400 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	IGLV2-11	P01706	119 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	HNF1A	P20823	631 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PRKACG	P22612	351 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CALML3	P27482	149 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CCKAR	P32238	428 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PGF	P49763	221 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	AIF1	P55008	147 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	IL9R	Q01113	521 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TNFRSF17	Q02223	184 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	HYAL1	Q12794	435 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZNF177	Q13360	481 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	KIAA0141	Q14154	515 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	FASTK	Q14296	549 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CAMK4	Q16566	473 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	UPP1	Q16831	310 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	MTHFSD	Q2M296	383 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ATF7IP2	Q5U623	682 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SEL1L3	Q68CR1	1132 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	BHLHB9	Q6PI77	547 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ATRAID	Q6UW56	229 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	C3P1	Q6ZMU1	363 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	KIF6	Q6ZMV9	814 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006		Q6ZRP5	223 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DCUN1D3	Q8IWE4	304 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006		Q8N9P0	234 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR4F17	Q8NGA8	305 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR52B6	Q8NGF0	335 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TMEM190	Q8WZ59	177 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DLX4	Q92988	240 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DHTKD1	Q96HY7	919 aa	Predicted RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR4F4	Q96R69	305 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	GPR174	Q9BXC1	333 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	WDR13	Q9H1Z4	485 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NT5DC2	Q9H857	520 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	WDR41	Q9HAD4	459 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	IL1RAP	Q9NPH3	570 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DCAF13	Q9NV06	445 aa	Known RBP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NMRK1	Q9NWW6	199 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	MBD2	Q9UBB5	411 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	EMCN	Q9ULC0	261 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	DHRS7	Q9Y394	339 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NAALAD2	Q9Y3Q0	740 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SPACA6	W5XKT8	324 aa		4.23	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	IGHV3-20	A0A0C4DH32	117 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZSCAN12	O43309	604 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NXPH4	O95158	308 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	IL1B	P01584	269 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ADORA3	P0DMS8	318 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SELE	P16581	610 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	UQCRC2	P22695	453 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	GDI1	P31150	447 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TAGLN2	P37802	199 aa	Known RBP	4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	MAPK6	Q16659	721 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ADAMTSL4-AS1	Q5T5F5	129 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	AGAP7P	Q5VUJ5	663 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PYHIN1	Q6K0P9	492 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	PNCK	Q6P2M8	343 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TMEM184A	Q6ZMB5	413 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	MOB2	Q70IA6	237 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	KCNMB4	Q86W47	210 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	CDH26	Q8IXH8	852 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ANKFN1	Q8N957	763 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NUP37	Q8NFH4	326 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	OR52J3	Q8NH60	311 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ZNF519	Q8TB69	540 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	SPPL2A	Q8TCT8	520 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	RNF139	Q8WU17	664 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	ADIPOR1	Q96A54	375 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	NODAL	Q96S42	347 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	C19orf43	Q9BQ61	176 aa		4.22	□□□□□ -1.73
CALCOCO2-222	ENST00000514006	TBC1D10A	Q9BXI6	508 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms