RNA–Protein interactions for RNA: ENST00000513677.5

GYPB-215, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 221 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-215ENST00000513677 DUSP8Q13202 625 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 NFYCQ13952 458 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 DAZAP2Q15038 168 aaPredicted RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 FBXO48Q5FWF7 155 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 PIGGQ5H8A4 983 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 ADNP2Q6IQ32 1131 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 TMIGD1Q6UXZ0 262 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 FRA10AC1Q70Z53 315 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 MAATS1Q7Z4T9 603 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 YTHDF3Q7Z739 585 aaKnown RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 LACC1Q8IV20 430 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 RASGEF1CQ8N431 466 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 SNX31Q8N9S9 440 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 ZNF610Q8N9Z0 462 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 SPC24Q8NBT2 197 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 OR10G3Q8NGC4 313 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 OR14K1Q8NGZ2 314 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 OR14A16Q8NHC5 309 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 MAIP1Q8WWC4 291 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 SGCZQ96LD1 299 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 ZNF597Q96LX8 424 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 SERPINB12Q96P63 405 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 QRFPRQ96P65 431 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 DGAT2Q96PD7 388 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 F2RL3Q96RI0 385 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 SERINC2Q96SA4 455 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 RBM24Q9BX46 236 aaKnown RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 NPLQ9BXD5 320 aaPredicted RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 REXO4Q9GZR2 422 aaKnown RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 IFT22Q9H7X7 185 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 CLK4Q9HAZ1 481 aaKnown RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 XAB2Q9HCS7 855 aaKnown RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 BEX4Q9NWD9 120 aaPredicted RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 C6orf203Q9P0P8 240 aaPredicted RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 IKZF3Q9UKT9 509 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 CNOT11Q9UKZ1 510 aaKnown RBP5.29□□□□□ -1.56
GYPB-215ENST00000513677 KCNE2Q9Y6J6 123 aa5.29□□□□□ -1.56
GYPB-215ENST00000513677 NINQ8N4C6 2090 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 RTTNQ86VV8 2226 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 FN1P02751 2386 aaKnown RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 A0A1W2PPR1 153 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 LRIT2A6NDA9 550 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 AHRRA9YTQ3 701 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 RTCAO00442 366 aaKnown RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 CYR61O00622 381 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 AHSGP02765 367 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 HRGP04196 525 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 PCNAP12004 261 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 GNAZP19086 355 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 CPN2P22792 545 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 TCEA1P23193 301 aaKnown RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 CTSSP25774 331 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 GABRB3P28472 473 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 CEACAM8P31997 349 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 BUD31P41223 144 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 SSR2P43308 183 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 HERVK_113P63132 956 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 ERVK-8P63133 956 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 CRYZQ08257 329 aaKnown RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 FOXF2Q12947 444 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 SERTAD2Q14140 314 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 RCN2Q14257 317 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 ZNF267Q14586 743 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 CRYMQ14894 314 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 EFTUD2Q15029 972 aaKnown RBP eCLIP5.28□□□□□ -1.56
GYPB-215ENST00000513677 HYAL4Q2M3T9 481 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 ZNF791Q3KP31 576 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 EIPR1Q53HC9 387 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 DCST1Q5T197 706 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 TTC27Q6P3X3 843 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 DRICH1Q6PGQ1 229 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 DGAT2L6Q6ZPD8 337 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 ESPNLQ6ZVH7 1005 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 SLC29A4Q7RTT9 530 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 CXorf67Q86X51 503 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 C9orf40Q8IXQ3 194 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 LMNTD2Q8IXW0 634 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 PM20D2Q8IYS1 436 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 PRR22Q8IZ63 422 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 GCNT2Q8N0V5 402 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 KRT78Q8N1N4 520 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 LRRC25Q8N386 305 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 C9orf106Q8NAJ2 232 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 OR2L5Q8NG80 312 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 RDH11Q8TC12 318 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 ZNF721Q8TF20 911 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 SPACA9Q96E40 222 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 PIK3IP1Q96FE7 263 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 CFAP36Q96G28 342 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 SENP5Q96HI0 755 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 KRT12Q99456 494 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 TIMP4Q99727 224 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 CCL19Q99731 98 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 MAPKAP1Q9BPZ7 522 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 WDR83Q9BRX9 315 aaKnown RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 ERVK-6Q9BXR3 956 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 PITHD1Q9GZP4 211 aaPredicted RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 C12orf65Q9H3J6 166 aaKnown RBP5.28□□□□□ -1.56
GYPB-215ENST00000513677 LZTFL1Q9NQ48 299 aa5.28□□□□□ -1.56
GYPB-215ENST00000513677 KLHL28Q9NXS3 571 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms