RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 STAC2Q6ZMT1 411 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 FAM214BQ7L5A3 538 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.84□□□□□ -0.83
DDX41-216ENST00000513562 UBQLNLQ8IYU4 475 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 SPATA6LQ8N4H0 392 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 GBP7Q8N8V2 638 aaPredicted RBP9.84□□□□□ -0.83
DDX41-216ENST00000513562 FNDC9Q8TBE3 224 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 GTPBP3Q969Y2 492 aaKnown RBP9.84□□□□□ -0.83
DDX41-216ENST00000513562 CFAP36Q96G28 342 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 LCORQ96JN0 433 aaPredicted RBP9.84□□□□□ -0.83
DDX41-216ENST00000513562 CD244Q9BZW8 370 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 DDX31Q9H8H2 851 aaKnown RBP9.84□□□□□ -0.83
DDX41-216ENST00000513562 CD274Q9NZQ7 290 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 CFL2Q9Y281 166 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 TSC22D4Q9Y3Q8 395 aa9.84□□□□□ -0.83
DDX41-216ENST00000513562 MAGED1Q9Y5V3 778 aaPredicted RBP9.84□□□□□ -0.83
DDX41-216ENST00000513562 DSCAMO60469 2012 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 A0A096LNT2 108 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 OR6C70A6NIJ9 312 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 EFCAB8A8MWE9 144 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 H0YC42 278 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 PGRMC2O15173 223 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 GPRIN2O60269 458 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 CD1DP15813 335 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 PTMSP20962 102 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 NT5EP21589 574 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 TCEA1P23193 301 aaKnown RBP9.83□□□□□ -0.84
DDX41-216ENST00000513562 DPP4P27487 766 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 PIK3R1P27986 724 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 CDKN1AP38936 164 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 ELK3P41970 407 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 TPD52P55327 224 aaPredicted RBP9.83□□□□□ -0.84
DDX41-216ENST00000513562 EEFSECP57772 596 aaKnown RBP9.83□□□□□ -0.84
DDX41-216ENST00000513562 PON3Q15166 354 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 GRHL2Q6ISB3 625 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 WFDC8Q8IUA0 241 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 LILRB1Q8NHL6 650 aaPredicted RBP9.83□□□□□ -0.84
DDX41-216ENST00000513562 RAB3IL1Q8TBN0 382 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 RNF138Q8WVD3 245 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 FBXW5Q969U6 566 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 TMCO6Q96DC7 493 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 MTERF1Q99551 399 aaKnown RBP9.83□□□□□ -0.84
DDX41-216ENST00000513562 MCMBPQ9BTE3 642 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 PINK1Q9BXM7 581 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 BEX2Q9BXY8 128 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 OR10A4Q9H209 315 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 LPAR3Q9UBY5 353 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 CHMP2BQ9UQN3 213 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 LIPT1Q9Y234 373 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 USF3Q68DE3 2245 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 NINQ8N4C6 2090 aa9.83□□□□□ -0.84
DDX41-216ENST00000513562 MEGF8Q7Z7M0 2845 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 DNALI1O14645 258 aaPredicted RBP9.82□□□□□ -0.84
DDX41-216ENST00000513562 TO15178 435 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 ALDOAP04075 364 aaKnown RBP9.82□□□□□ -0.84
DDX41-216ENST00000513562 CPMP14384 443 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 EPB42P16452 691 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 DRD5P21918 477 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 GRK2P25098 689 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 PTX3P26022 381 aaPredicted RBP9.82□□□□□ -0.84
DDX41-216ENST00000513562 XKP51811 444 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 SUCLG1P53597 346 aaKnown RBP9.82□□□□□ -0.84
DDX41-216ENST00000513562 DSCR4P56555 118 aaPredicted RBP9.82□□□□□ -0.84
DDX41-216ENST00000513562 ATP6V0D1P61421 351 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 ZNF844Q08AG5 666 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 MGAT5Q09328 741 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 MGAT2Q10469 447 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 CUL3Q13618 768 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 PRICKLE4Q2TBC4 344 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 TMEM249Q2WGJ8 235 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 HP1BP3Q5SSJ5 553 aaPredicted RBP9.82□□□□□ -0.84
DDX41-216ENST00000513562 OR5M10Q6IEU7 315 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 NUDT13Q86X67 352 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 OR4K14Q8NGD5 310 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 OR6K3Q8NGY3 331 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 GRK7Q8WTQ7 553 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 SMAP2Q8WU79 429 aaPredicted RBP9.82□□□□□ -0.84
DDX41-216ENST00000513562 UBTD2Q8WUN7 234 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 ROBO4Q8WZ75 1007 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 SLC35A4Q96G79 324 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 COL21A1Q96P44 957 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 LRRC1Q9BTT6 524 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 ACTR6Q9GZN1 396 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 RHOJQ9H4E5 214 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 BARX1Q9HBU1 254 aaPredicted RBP9.82□□□□□ -0.84
DDX41-216ENST00000513562 PLSCR4Q9NRQ2 329 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 ZNF639Q9UID6 485 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 PLLPQ9Y342 182 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 RNF115Q9Y4L5 304 aa9.82□□□□□ -0.84
DDX41-216ENST00000513562 IGHV4-30-2A0A087WSY4 118 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 K7EPI3 171 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 SEC14L5O43304 696 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 NDUFS7O75251 213 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 CBX7O95931 251 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 GBAP04062 536 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 S100BP04271 92 aaPredicted RBP9.81□□□□□ -0.84
DDX41-216ENST00000513562 CCDC166P0CW27 439 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 FCGR2AP12318 317 aa9.81□□□□□ -0.84
DDX41-216ENST00000513562 PORP16435 677 aaPredicted RBP9.81□□□□□ -0.84
DDX41-216ENST00000513562 PPICP45877 212 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms