RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CSN2P05814 226 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 TFPIP10646 304 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 GIFP27352 417 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 VLDLRP98155 873 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 STK11Q15831 433 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 TIGD3Q6B0B8 471 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 XAF1Q6GPH4 301 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 NUDT13Q86X67 352 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 BEST3Q8N1M1 668 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 C12orf76Q8N812 135 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 OR5T2Q8NGG2 359 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 MAFIPQ8WZ33 124 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 OR5M11Q96RB7 305 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 KXD1Q9BQD3 176 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 CDADC1Q9BWV3 514 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 MAFFQ9ULX9 164 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 PLEKHA6Q9Y2H5 1048 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF840PA6NDX5 716 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 MCIDASD6RGH6 385 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 F8W036 122 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 SCAMP2O15127 329 aaKnown RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 PCDHGA12O60330 932 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 SPDEFO95238 335 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 SPNP16150 400 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 VAMP1P23763 118 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 OR12D2P58182 307 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 BLOC1S1P78537 153 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 MC2RQ01718 297 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 KCNC3Q14003 757 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 OPCMLQ14982 345 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF791Q3KP31 576 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 EOGTQ5NDL2 527 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 MS4A15Q8N5U1 240 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 OR7G3Q8NG95 312 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 CD200R1Q8TD46 325 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 APIPQ96GX9 242 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 EMC7Q9NPA0 242 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 FANCFQ9NPI8 374 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 ERVK-19Q9WJR5 959 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 PADI2Q9Y2J8 665 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 BACE2Q9Y5Z0 518 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 A0A0G2JN53 185 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 OR6C74A6NCV1 312 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 DNASE1L1P49184 302 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 SLAMF1Q13291 335 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 LRRC37A5PQ49AS3 106 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 SMUG1Q53HV7 270 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 Q6ZVL8 140 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 PDZD3Q86UT5 571 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 SAMD14Q8IZD0 417 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 IQCF1Q8N6M8 205 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 IL17RDQ8NFM7 739 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 FKBP10Q96AY3 582 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 PFDN5Q99471 154 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF334Q9HCZ1 680 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 LYARQ9NX58 379 aaKnown RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 NAP1L6A6NFF2 107 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 RGS13O14921 159 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 CFIP05156 583 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF8P17098 575 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 GKP32189 559 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 TGFBR1P36897 503 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 GPR68Q15743 365 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 AMZ1Q400G9 498 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 TMC8Q8IU68 726 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 MFSD4AQ8N468 514 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 OR2T33Q8NG76 320 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 OR4K5Q8NGD3 323 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 TFGQ92734 400 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 UBE2FQ969M7 185 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF419Q96HQ0 510 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-211ENST00000513346 GSX2Q9BZM3 304 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF385DQ9H6B1 395 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 WASH6PQ9NQA3 447 aa10.69□□□□□ -0.7
TCOF1-211ENST00000513346 SMAD9O15198 467 aaKnown RBP10.68□□□□□ -0.7
TCOF1-211ENST00000513346 SGCEO43556 437 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 LDB2O43679 373 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 OAZ2O95190 189 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 GSRP00390 522 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 SDC1P18827 310 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 IGFALSP35858 605 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 TAP2Q03519 686 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF33BQ06732 778 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 NFATC2Q13469 925 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 PRAMEF14Q5SWL7 426 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 SHFQ7M4L6 423 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 ZNF227Q86WZ6 799 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 LRRC28Q86X40 367 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-211ENST00000513346 TEX37Q96LM6 180 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 DPYSL5Q9BPU6 564 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 NKX2-4Q9H2Z4 354 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 SPHK2Q9NRA0 654 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 SLCO3A1Q9UIG8 710 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 CFAP20Q9Y6A4 193 aaKnown RBP10.68□□□□□ -0.7
TCOF1-211ENST00000513346 CACNA1GO43497 2377 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 LOC100509620A0A075B734 347 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 C13orf42A0A1B0GVH6 325 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 FXYD1O00168 92 aa10.68□□□□□ -0.7
TCOF1-211ENST00000513346 KCNK2O95069 426 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms