RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 C3orf56Q8N813 242 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 OR56A3Q8NH54 315 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 MZB1Q8WU39 189 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 SLC5A11Q8WWX8 675 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 PPWD1Q96BP3 646 aaKnown RBP8.2□□□□□ -1.1
NUP54-211ENST00000512151 TMEM41AQ96HV5 264 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 VPS39Q96JC1 886 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 GAL3ST4Q96RP7 486 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 GPR22Q99680 433 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 NTMT1Q9BV86 223 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 OR2B2Q9GZK3 357 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 WWTR1Q9GZV5 400 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 RHOJQ9H4E5 214 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 CAB39LQ9H9S4 337 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 BARX1Q9HBU1 254 aaPredicted RBP8.2□□□□□ -1.1
NUP54-211ENST00000512151 SERHLQ9NQF3 203 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 WWOXQ9NZC7 414 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 KLHL42Q9P2K6 505 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 ZNF180Q9UJW8 692 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 KCNS2Q9ULS6 477 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 RNF112Q9ULX5 631 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 DAPP1Q9UN19 280 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 MRPS33Q9Y291 106 aaKnown RBP8.2□□□□□ -1.1
NUP54-211ENST00000512151 B3GALT5Q9Y2C3 310 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 DHRS7Q9Y394 339 aa8.2□□□□□ -1.1
NUP54-211ENST00000512151 LOC100289279A0A1B0GTE1 492 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 A0A1W2PP18 115 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 A0A1W2PPM1 405 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 LRIT2A6NDA9 550 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 SMIM23A6NLE4 172 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 EMC8O43402 210 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 FGF17O60258 216 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 WISP3O95389 354 aaPredicted RBP8.19□□□□□ -1.1
NUP54-211ENST00000512151 CD8BP10966 210 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 ZNF708P17019 499 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 SPRP35270 261 aaPredicted RBP8.19□□□□□ -1.1
NUP54-211ENST00000512151 NUDT6P53370 316 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 PLA2G16P53816 162 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 IRX1P78414 480 aaPredicted RBP8.19□□□□□ -1.1
NUP54-211ENST00000512151 CSHL1Q14406 222 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 ZNF460Q14592 562 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 EBPQ15125 230 aaKnown RBP8.19□□□□□ -1.1
NUP54-211ENST00000512151 RPS6KA2Q15349 733 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 GUSBP1Q15486 140 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 ZNF672Q499Z4 452 aaPredicted RBP8.19□□□□□ -1.1
NUP54-211ENST00000512151 MIDNQ504T8 468 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
NUP54-211ENST00000512151 MROH9Q5TGP6 573 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 FAM166AQ6J272 317 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 ALKBH2Q6NS38 261 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 FAM45BPQ6NSW5 357 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 ANGPTL8Q6UXH0 198 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 TREML4Q6UXN2 200 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 P4HA3Q7Z4N8 544 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 TDRPQ86YL5 185 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 TBC1D19Q8N5T2 526 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 ZNF525Q8N782 197 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 GPATCH11Q8N954 259 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 SEMA6DQ8NFY4 1073 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 RDH11Q8TC12 318 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 FAM45AQ8TCE6 357 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 REPS1Q96D71 796 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 MSI2Q96DH6 328 aaKnown RBP8.19□□□□□ -1.1
NUP54-211ENST00000512151 C11orf24Q96F05 449 aaPredicted RBP8.19□□□□□ -1.1
NUP54-211ENST00000512151 FAR2Q96K12 515 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 TMEM109Q9BVC6 243 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 TBK1Q9UHD2 729 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 DLGAP4Q9Y2H0 992 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 VWA7Q9Y334 891 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 RNF115Q9Y4L5 304 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 CMYA5Q8N3K9 4069 aa8.19□□□□□ -1.1
NUP54-211ENST00000512151 TLDC2A0PJX2 215 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 SLC22A20A6NK97 555 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 H0YC42 278 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 TP53I11O14683 189 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 PFDN6O15212 129 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 PHGDHO43175 533 aaKnown RBP8.18□□□□□ -1.1
NUP54-211ENST00000512151 KIAA0513O60268 411 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 INHBAP08476 426 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 PPP3CBP16298 524 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 PTGDSP41222 190 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 TPD52P55327 224 aaPredicted RBP8.18□□□□□ -1.1
NUP54-211ENST00000512151 CLDN15P56746 228 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 STXBP1P61764 594 aaKnown RBP8.18□□□□□ -1.1
NUP54-211ENST00000512151 HERVK_113P63132 956 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 ERVK-8P63133 956 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 IGLV3-21P80748 117 aaPredicted RBP8.18□□□□□ -1.1
NUP54-211ENST00000512151 SERTAD2Q14140 314 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 PDCD2Q16342 344 aaPredicted RBP8.18□□□□□ -1.1
NUP54-211ENST00000512151 CR1LQ2VPA4 569 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 PAQR3Q6TCH7 311 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 CLEC2AQ6UVW9 174 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 NXPE4Q6UWF7 544 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 ENPP6Q6UWR7 440 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 LRIG3Q6UXM1 1119 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 ZNF771Q7L3S4 317 aaPredicted RBP8.18□□□□□ -1.1
NUP54-211ENST00000512151 VN1R5Q7Z5H4 357 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 CMC1Q7Z7K0 106 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 DTX2Q86UW9 622 aa8.18□□□□□ -1.1
NUP54-211ENST00000512151 PLD6Q8N2A8 252 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms