RNA–Protein interactions for RNA: ENST00000512098.5

SSBP2-215, Transcript of single stranded DNA binding protein 2, human

TSL 5

Gene SSBP2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP2-215	ENST00000512098	DESI1	Q6ICB0	168 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	ZNF549	Q6P9A3	640 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098		Q6ZSR9	355 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	SVOPL	Q8N434	492 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	ZDHHC22	Q8N966	263 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	DOK4	Q8TEW6	326 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	CCT6B	Q92526	530 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	KRT35	Q92764	455 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	TANK	Q92844	425 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	RIT1	Q92963	219 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	MFSD3	Q96ES6	412 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	KCNC2	Q96PR1	638 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	SUCNR1	Q9BXA5	334 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	IL22	Q9GZX6	179 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	CCDC68	Q9H2F9	335 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	IKZF3	Q9UKT9	509 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	CLEC4A	Q9UMR7	237 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	MGAT4B	Q9UQ53	548 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	COMMD10	Q9Y6G5	202 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	KCNE2	Q9Y6J6	123 aa		11.21	□□□□□ -0.61
SSBP2-215	ENST00000512098	EFCAB8	A8MWE9	144 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	SEC14L5	O43304	696 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	TJP3	O95049	919 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	SCEL	O95171	688 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	VSIG8	P0DPA2	414 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	COL6A2	P12110	1019 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	EPHA1	P21709	976 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	CPN2	P22792	545 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	FABP6	P51161	128 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	HADHB	P55084	474 aa	Known RBP	11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	CLDN20	P56880	219 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	UBA52	P62987	128 aa	Known RBP	11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	CRADD	P78560	199 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	HMGCS1	Q01581	520 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	NR1I3	Q14994	352 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	TSC22D1	Q15714	1073 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	ACOT4	Q8N9L9	421 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	FBF1	Q8TES7	1133 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	EEF1AKMT1	Q8WVE0	214 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	KIFC1	Q9BW19	673 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	MMP27	Q9H306	513 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	GOLPH3	Q9H4A6	298 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	RPF2	Q9H7B2	306 aa	Known RBP	11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	NT5DC2	Q9H857	520 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	ESM1	Q9NQ30	184 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	ZNF337	Q9Y3M9	751 aa		11.2	□□□□□ -0.62
SSBP2-215	ENST00000512098	ESPN	B1AK53	854 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	LILRA1	O75019	489 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	ATP5A1	P25705	553 aa	Known RBP	11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	APEX1	P27695	318 aa	Known RBP	11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	GCH1	P30793	250 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	SSTR4	P31391	388 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	SLC6A8	P48029	635 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	RGS4	P49798	205 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	DSCR4	P56555	118 aa	Predicted RBP	11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	VN1R5	Q7Z5H4	357 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	THOC6	Q86W42	341 aa	Known RBP	11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	ZNF615	Q8N8J6	731 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	SRFBP1	Q8NEF9	429 aa	Known RBP	11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	KISS1R	Q969F8	398 aa	Predicted RBP	11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	IQCD	Q96DY2	449 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	MTBP	Q96DY7	904 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	VPS39	Q96JC1	886 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	TBCD	Q9BTW9	1192 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	PRRG4	Q9BZD6	226 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	PITHD1	Q9GZP4	211 aa	Predicted RBP	11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	SAP130	Q9H0E3	1048 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	NXF5	Q9H1B4	397 aa	Known RBP	11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	CDC42EP4	Q9H3Q1	356 aa	Known RBP	11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	FOLH1B	Q9HBA9	442 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	ANO10	Q9NW15	660 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	MS4A12	Q9NXJ0	267 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	ASIC3	Q9UHC3	531 aa		11.19	□□□□□ -0.62
SSBP2-215	ENST00000512098	COL7A1	Q02388	2944 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	ANKDD1B	A6NHY2	528 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098		B4DXG7	233 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098		E7EVH7	732 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	UGT2B11	O75310	529 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	H2AFY	O75367	372 aa	Known RBP	11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	TUBB	P07437	444 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	C1GALT1C1L	P0DN25	315 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	TCEA1	P23193	301 aa	Known RBP	11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	CNTF	P26441	200 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	GIF	P27352	417 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	SESN2	P58004	480 aa	Predicted RBP	11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	ITGAD	Q13349	1161 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	PPA1	Q15181	289 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	SGCB	Q16585	318 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	NEPRO	Q6NW34	567 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	SHQ1	Q6PI26	577 aa	Known RBP	11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	RBM43	Q6ZSC3	357 aa	Known RBP	11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	UBE3D	Q7Z6J8	389 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	GLCCI1	Q86VQ1	547 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	MYO1H	Q8N1T3	1032 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	TEX29	Q8N6K0	151 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	NXNL1	Q96CM4	212 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	SORCS2	Q96PQ0	1159 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	NPAP1	Q9NZP6	1156 aa		11.18	□□□□□ -0.62
SSBP2-215	ENST00000512098	POU2F3	Q9UKI9	436 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 760.3 ms